Prof Timothy Cootes

Research Fellow

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Publications

  1. 2019
  2. Published

    A New Innovative Software to Automatically Outline Condyles In Orthopantomography

    Krishnakumar Raja, V. B., Sasikala, B., Elavenil, P., Sethupathy Cheeman, R., Cootes, T. & Lindner, C., 1 Nov 2019, In : International Journal of Medical Science and Innovative Research. 4, 6, p. 123-134

    Research output: Contribution to journalArticle

  3. Accepted/In press

    A Hybrid Machine Learning Approach Using LBP Descriptor and PCA for Age-Related Macular Degeneration Classification in OCTA Images

    Alfahaid, A., Morris, T., Cootes, T., Keane, P. A., Khalid, H., Pontikos, N., Sergouniotis, P. & Balaskas, K., 16 Apr 2019, (Accepted/In press) Communications in Computer and Information Science (CCIS). 12 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  4. Published

    CHANGES IN BONE SHAPE ARE BOTH A RISK FACTOR FOR AND A RESULT OF HIP OSTEOARTHRITIS, A FOLLOW-UP STUDY IN THE CHECK COHORT

    Gielis, W., Rayegan, H., Lindner, C., Davison, A. K., Arbabi, V., Cootes, T. F., de Jong, P. A. & Weinans, H., Apr 2019, In : Osteoarthritis and Cartilage. 27, p. S320-S321

    Research output: Contribution to journalMeeting Abstract

  5. Published

    Fully automatic teeth segmentation in adult OPG images

    Blanco, N. V., Cootes, T. F., Lindner, C., Carmona, I. T. & Carreira, M. J., 1 Jan 2019, Computational Methods and Clinical Applications in Musculoskeletal Imaging - 6th International Workshop, MSKI 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. Zheng, G., Vrtovec, T., Yao, J. & Pozo, J. M. (eds.). Springer Nature, p. 11-21 11 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11404 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  6. Published

    An automated workflow based on hip shape improves personalized risk prediction for hip osteoarthritis in the CHECK study.

    Gielis, W. P., Weinans, H. H., Welsing, P. M. J., van Spil, W. E., Agricola, R., Cootes, T., de Jong, P. A. & Lindner, C., 2019, In : Osteoarthritis and cartilage / OARS, Osteoarthritis Research Society.

    Research output: Contribution to journalArticle

  7. Accepted/In press

    Automated estimation of the mechanical Hip-Knee-Ankle angle using standard knee radiographs

    Gielis, W. P., Rayegan, H., Arbabi, V., Ahmadi Brooghani, S. Y., Lindner, C., Cootes, T., de Jong, P. A., Weinans, H. H. & Custers, R., 2019, (Accepted/In press).

    Research output: Contribution to conferencePoster

  8. Published

    Automated scoring of aortic calcification in vertebral fracture assessment images

    Chaplin, L. & Cootes, T., 2019, Medical Imaging 2019: Computer-Aided Diagnosis. Mori, K. & Hahn, H. K. (eds.). SPIE, 1095038. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10950).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  9. Published

    Automatic detection of wrist fractures from posteroanterior and lateral radiographs: A deep learning-based approach

    Ebsim, R., Naqvi, J. & Cootes, T. F., 2019, Computational Methods and Clinical Applications in Musculoskeletal Imaging - 6th International Workshop, MSKI 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. Zheng, G., Vrtovec, T., Yao, J. & Pozo, J. M. (eds.). Springer Nature, p. 114-125 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11404 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  10. Published

    Error Estimation for Appearance Model Segmentation of Musculoskeletal Structures using Multiple, Independent Sub-models

    Bromiley, P., Kariki, E. & Cootes, T., 2019, Computational Methods and Clinical Applications for Spine Imaging: The Fifth MICCAI CSI Workshop & Challenge,.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  11. Published

    Landmark Localisation in Radiographs Using Weighted Heatmap Displacement Voting

    Medical Student Annotation Collaborative, 2019, Computational Methods and Clinical Applications in Musculoskeletal Imaging - 6th International Workshop, MSKI 2018, Held in Conjunction with MICCAI 2018, Revised Selected Papers. Zheng, G., Vrtovec, T., Yao, J. & Pozo, J. M. (eds.). Springer Nature, Vol. 11404 LNCS. p. 73-85 13 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11404 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  12. Published

    Measurement of synovial tissue volume in knee osteoarthritis using a semiautomated MRI-based quantitative approach.

    Perry, T., Gait, A., O'Neill, T., Parkes, M., Hodgson, R., Callaghan, M. J., Arden, N. K., Felson, D. & Cootes, T., 2019, In : Magn Reson Med. 81, 5, p. 3056-3064

    Research output: Contribution to journalArticle

  13. Published

    Perthes Disease Classification Using Shape and Appearance Modelling

    Davison, A., Cootes, T., Perry, D. C., Luo, W. & Lindner, C., 2019, 6th MICCAI Workshop on Computational Methods and Clinical Applications in Musculoskeletal Imaging. Springer Nature, Vol. 11404 LNCS. p. 86-98 (Lecture Notes in Computer Science; vol. 11404).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  14. 2018
  15. Published

    Classification of Osteoporotic Vertebral Fractures Using Shape and Appearance Modelling

    Bromiley, P., Kariki, E., Adams, J. & Cootes, T., 1 Jan 2018, Computational Methods and Clinical Applications in Musculoskeletal Imaging: 5th International Workshop, MSKI 2017, Held in Conjunction with MICCAI 2017, Quebec City, QC, Canada, September 10, 2017, Revised Selected Papers. Springer Nature

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  16. Published
  17. 2017
  18. Published

    Shape and Texture Modeling of Hip Bone Density for Fracture Discrimination.

    Shepherd, J. A., Mahmoudzadeh, A. P., Fan, B., Chaplin, L., Cootes, T., Cauley, J. A., Cawthon, P., Cummings, S., Liu, F., Lindner, C., Murphy, R., Visser, M. & Schwartz, A., Dec 2017, In : Journal of Bone and Mineral Research. 32, p. S178-S178

    Research output: Contribution to journalMeeting Abstract

  19. Published

    Adaptable landmark localisation: Applying model transfer learning to a shape model matching system

    Lindner, C., Waring, D., Thiruvenkatachari, B., O’Brien, K. & Cootes, T. F., Sep 2017, Medical Image Computing and Computer Assisted Intervention − MICCAI 2017 - 20th International Conference, Proceedings. Springer Nature, Vol. 10433 LNCS. p. 144-151 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10433 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  20. Published
  21. Published

    Prediction of risk for radiographic hip osteoarthritis in subjects with early osteoarthritis of hip or knee

    Gielis, W. P., Weinans, H. H., van Spil, W. E., Agricola, R., Cootes, T. F., de Jong, P. A. & Lindner, C., Apr 2017, In : Osteoarthritis and Cartilage. 25, p. S12-S13

    Research output: Contribution to journalLetter

  22. Published

    Automatic Annotation of Radiographs using Random Forest Regression Voting for Building Statistical Models for Skeletal Maturity

    Adeshina, S. A., Lindner, C. & Cootes, T., Jan 2017, In : International Journal of Computer Techniques. 4, 1, p. 49-55

    Research output: Contribution to journalArticle

  23. Published

    Combination of Lateral and PA View Radiographs to Study Development of Knee OA and Associated Pain

    Minciullo, L., Thomson, J. & Cootes, T., 2017, Medical Imaging 2017: Computer-Aided Diagnosis. SPIE, Vol. 10134. (SPIE Proceedings).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  24. Published

    Fully Automated Shape Analysis for Detection of Osteoarthritis from Lateral Knee Radiographs

    Minciullo, L. & Cootes, T., 2017, International Conference on Patern Recognition.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  25. Published

    Fully Automatic Detection of Distal Radius Fractures from Posteroanterior and Lateral Radiographs

    Ebsim, R., Naqvi, J. & Cootes, T., 2017, Computer Assisted and Robotic Endoscopy and Clinical Image-Based Procedures - 4th International Workshop, CARE 2017 and 6th International Workshop, CLIP 2017 Held in Conjunction with MICCAI 2017, Proceedings. Springer Nature, Vol. 10550 LNCS. p. 91-98 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10550 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  26. Published

    Fully Automatic Localisation of Vertebrae in CT images using Random Forest Regression Voting

    Bromiley, P., Kariki, E., Adams, J. & Cootes, T., 2017, Computational Methods and Clinical Applications for Spine Imaging: 4th International Conference and Challenge, CSI 2016. Yao, J., Vrtovec, T., Zheng, G., Frangi, A., Glocker, B. & Li, S. (eds.). Springer Nature, Vol. LNCS 10182. p. 51-63 13 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  27. Published

    Indecisive trees for classification and prediction of knee osteoarthritis

    Minciullo, L., Bromiley, P. A., Felson, D. T. & Cootes, T. F., 2017, Machine Learning in Medical Imaging - 8th International Workshop, MLMI 2017, Held in Conjunction with MICCAI 2017, Proceedings. Springer Nature, Vol. 10541 LNCS. p. 283-290 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 10541 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  28. Published

    Modeling the shape and composition of the human body using dual energy X-ray absorptiometry images

    Shepherd, J. A., Ng, B. K., Fan, B., Schwartz, A. V., Cawthon, P., Cummings, S. R., Kritchevsky, S., Nevitt, M., Santanasto, A. & Cootes, T. F., 2017, In : PLoS ONE. 12, 4, e0175857.

    Research output: Contribution to journalArticle

  29. 2016
  30. Published

    New software to automatically outline bones in OPG

    Sasikala, B., Krishnakumar Raja, V. B., Cootes, T. & Lindner, C., Nov 2016, p. 167.

    Research output: Contribution to conferencePaper

  31. Published

    Detecting osteophytes in radiographs of the knee to diagnose Osteoarthritis

    Thomson, J., O'Neill, T., Felson, D. & Cootes, T., 1 Oct 2016, Machine Learning in Medical Imaging: 7th International workshop, MLMI 2016 held in conjunction with MICCAI 2016, Athens, Greece, October 17, 2016, Proceedings. Wang, L., Adeli, E., Wang, Q., Shi, Y. & Suk, H-I. (eds.). Switzerland: Springer Nature, p. 45-52 8 p. (Lecture Notes in Computer Science (LNCS); vol. 10019).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  32. Published

    Fully Automatic System for Accurate Localisation and Analysis of Cephalometric Landmarks in Lateral Cephalograms

    Lindner, C., Wang, C-W., Huang, C-T., Li, C-H., Chang, S-W. & Cootes, T., 20 Sep 2016, In : Scientific Reports. 6, 33581.

    Research output: Contribution to journalArticle

  33. Published

    Synovial volume vs synovial measurements from dynamic contrast enhanced MRI as measures of response in osteoarthritis

    Gait, A., Hodgson, R., Parkes, M., Hutchinson, C., O'Neill, T., Maricar, N., Marjanovic, E., Cootes, T. & Felson, D., Aug 2016, In : Osteoarthritis and Cartilage. 24, 8, p. 1392-1398 7 p.

    Research output: Contribution to journalArticle

  34. Published

    A benchmark for comparison of dental radiography analysis algorithms

    Wang, C-W., Huang, C-T., Lee, J-H., Li, C-H., Chang, S-W., Siao, M-J., Lai, T-M., Ibragimov, B., Vrtovec, T., Ronneberger, O., Fischer, P., Cootes, T. F. & Lindner, C., 2016, In : Medical Image Analysis. 31, p. 63-76

    Research output: Contribution to journalArticle

  35. Published

    Automatic localisation of vertebrae in DXA images using random forest regression voting

    Bromiley, P. A., Adams, J. E. & Cootes, T. F., 2016, Computational Methods and Clinical Applications for Spine Imaging - 3rd International Workshop and Challenge, CSI 2015 Held in Conjunction with MICCAI 2015, Revised Selected Papers. Springer Nature, Vol. 9402. p. 38-51 14 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9402).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  36. Published

    Fully automated radiographic knee shape analysis of the OAI dataset: Is knee shape asymmetry an early indicator of unilateral knee OA?

    Lindner, C. & Cootes, T., 2016, Proceedings of the 9th International Workshop on Osteoarthritis Imaging (IWOAI 2016). www.iwoai.org, p. 57

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  37. Published

    Multi-point Regression Voting for Shape Model Matching

    Bromiley, P., Lindner, C., Thomson, J., Wrigley, M. & Cootes, T., 2016, In : Procedia Computer Science. 90, p. 48-53 6 p.

    Research output: Contribution to journalArticle

  38. Published

    Synovial tissue volume: a treatment target in knee osteoarthritis (OA)

    O'Neill, TW., Parkes, MJ., Maricar, N., Marjanovic, E., Hodgson, R., Gait, A. D., Cootes, T. F., Hutchinson, C. E. & Felson, DT., 2016, In : Annals of the rheumatic diseases. 75, 1, p. 84-90 6 p.

    Research output: Contribution to journalArticle

  39. 2015
  40. Published

    Multi-View Constrained Local Models for Large Head Angle Facial Tracking

    Rajamanoharan, G. & Cootes, T. F., Dec 2015, Proceedings of IEEE International Conference on Computer Vision (ICCV-W15), Workshop on 300 Videos in the Wild (300-VW): Facial Landmark Tracking in-the-Wild Challenge and Workshop. Proceedings of IEEE International Conference on Computer Vision (ICCV-W15), Workshop on 300 Videos in the Wild (300-VW): Facial Landmark Tracking in-the-Wild Challenge and Workshop

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  41. Published

    Automated shape and texture analysis for detection of Osteoarthritis from radiographs of the knee

    Thompson, J., O’Neill, T., Felson, D. & Cootes, T. F., Oct 2015, Proc. MICCAI 2015 Part 2. Springer Nature, p. 127-135 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  42. Published

    Investigation of association between hip osteoarthritis susceptibility loci and radiographic proximal femur shape

    Lindner, C., Thiagarajah, S., Wilkinson, J. M., Panoutsopoulou, K., Day-Williams, A. G., The ArcOGEN Consortium, Cootes, T. F., Wallis, G. A. & Ollier, W., 28 Jul 2015, In : Arthritis & Rheumatology (Hoboken) . 67, 8, p. 2076-2084 9 p.

    Research output: Contribution to journalArticle

  43. Published

    Fully Automatic Cephalometric Evaluation using Random Forest Regression-Voting

    Lindner, C. & Cootes, T. F., 2015, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  44. Published

    Learning-Based Shape Model Matching: Training Accurate Models with Minimal Manual Input

    Lindner, C., Thomson, J., The ArcOGEN Consortium, Cootes, TF., Navab, N. (ed.), Hornegger, J. (ed.), Wells, WM. (ed.) & Frangi, AF. (ed.), 2015, The 18th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2015, Part III). Navab, N., Hornegger, J., Wells, WM. & Frangi, AF. (eds.). Springer Nature, Vol. 9351. p. 580-587 8 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  45. Published

    Robust and Accurate Shape Model Matching Using Random Forest Regression-Voting

    Lindner, C., Bromiley, P. A., Ionita, M. C. & Cootes, T. F., 2015, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 37, 9, p. 1862-1874 13 p.

    Research output: Contribution to journalArticle

  46. 2014
  47. Published

    Localization of Vertebrae on DXA VFA Images using Constrained Local Models with Random Forest Regression Voting

    Bromiley, P. A., Adams, J. & Cootes, T. F., 17 Oct 2014, Journal of Orthopaedic Translation Volume 2 Issue 4. p. 227-228 2 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  48. Published

    Localisation of Vertebrae on DXA Images using Constrained Local Models with Random Forest Regression Voting

    Bromiley, P., Cootes, T., Yao, J. (ed.), Glocker, B. (ed.), Klinder, T. (ed.) & Li, S. (ed.), 14 Sep 2014, Recent Advances in Computational Methods and Clinical Applications for Spine Imaging. Yao, J., Glocker, B., Klinder, T. & Li, S. (eds.). Switzerland: Springer Nature, Vol. 20. p. 159-171 13 p. (Lecture Notes in Computational Vision and Biomechanics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  49. Published

    Ensemble registration: Combining groupwise registration and segmentation

    Purwani, S., Twining, C., Cootes, T., Reyes-Aldasoro, C. C. (ed.) & Slabaugh, G. (ed.), Jul 2014, Proceedings of the 18th Conference on Medical Image Understanding and Analysis. Reyes-Aldasoro, C. C. & Slabaugh, G. (eds.). BMVA Press, p. 105-110 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  50. Published
  51. Published

    Indexed distribution analysis for improved significance testing of spatially heterogeneous parameter maps: Application to dynamic contrast-enhanced MRI biomarkers

    Waterton, J., Rose, C. J., O'Connor, J. P. B., Cootes, T. F., Taylor, C. J., Jayson, G. C., Parker, G. J. M. & Waterton, J. C., Mar 2014, In : Magnetic Resonance in Medicine. 71, 3, p. 1299-1311 13 p.

    Research output: Contribution to journalArticle

  52. Published

    Automatic Extraction of Hand-Bone Shapes using Random Forest Regression-Voting in the Constrained Local Model Framework (Extended Abstract)

    Lindner, C. & Cootes, TF., 2014, Proceedings of SHAPE 2014. Vol. 1. p. 17-17 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  53. Published

    Automatic segmentation of carpal area bones with random forest regression voting for estimating skeletal maturity in infants

    Adeshina, S. A., Lindner, C. & Cootes, T. F., 2014, host publication. IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  54. 2013
  55. Published

    Using Detailed Independent 3D sub-models to improve facial feature localisation and pose estimation.

    Caunce, A., Taylor, C. & Cootes, T., 18 Dec 2013, In : International Journal on Artificial Intelligence Tools. 18 p.

    Research output: Contribution to journalArticle

  56. Published

    A parts-and-geometry initialiser for 3D non-rigid registration using features derived from spin images

    Babalola, K., Gait, A. & Cootes, T. F., 23 Nov 2013, In : Neurocomputing. 120, p. 113-120 7 p.

    Research output: Contribution to journalArticle

  57. Published

    Development of a fully automatic shape model matching (FASMM) system to derive statistical shape models from radiographs: Application to the accurate capture and global representation of proximal femur shape

    Lindner, C., Thiagarajah, S., Wilkinson, J. M., The ArcOGEN Consortium, Wallis, G. A. & Cootes, T., Oct 2013, In : Osteoarthritis and Cartilage. 21, 10, p. 1537-1544 7 p.

    Research output: Contribution to journalArticle

  58. Published

    Using transmission electron microscopy and 3View to determine collagen fibril size and three-dimensional organization.

    Starborg, T., Kalson, N. S., Lu, Y., Mironov, A., Cootes, T. F., Holmes, D. F. & Kadler, K. E., 27 Jun 2013, In : Nature protocols. 8, 7, p. 1433-1448 15 p.

    Research output: Contribution to journalArticle

  59. Published

    Accurate Bone Segmentation in 2D Radiographs Using Fully Automatic Shape Model Matching Based On Regression-Voting

    Lindner, C., Thiagarajah, S., Wilkinson, JM., The ArcOGEN Consortium, Wallis, GA. & Cootes, T., 2013, The 16th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2013, Part II). Springer Nature, Vol. 8150. p. 181-1890 1710 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  60. Published

    Accurate Bone Segmentation in 2D Radiographs Using Fully Automatic Shape Model Matching Based On Regression-Voting

    Cootes, T. F., Lindner, C., Thiagarajah, S., Wilkinson, J. M., The ArcOGEN Consortium & Wallis, G. A., 2013, p. 181-189. 9 p.

    Research output: Contribution to conferencePoster

  61. Published

    Analysis of Proximal Femur Symmetry using Statistical Shape Models based on Data from the Osteoarthritis Initiative (Abstract)

    Lindner, C., Wallis, GA. & Cootes, TF., 2013, Proceedings of the Bone Research Society & British Orthopaedic Research Society Joint Annual Meeting 2013. The British Editorial Society of Bone & Joint Surgery

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  62. Published

    Fully automatic segmentation of the proximal femur using random forest regression voting

    Lindner, C., Thiagarajah, S., Wilkinson, J. M., Wallis, G. A. & Cootes, T. F., 2013, In : IEEE Transactions on Medical Imaging. 32, 8, p. 1462-1472 10 p., 6497663.

    Research output: Contribution to journalArticle

  63. Published

    Fully automatic system to accurately segment the proximal femur in anteroposterior pelvic radiographs

    Lindner, C., Thiagarajah, S., Wilkinson, M., The ArcOGEN Consortium, Wallis, GA. & Cootes, TF., 2013, Proceedings of UKRC 2013. p. 56-56 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  64. Published

    Multiple target marker tracking for real-time, accurate, and robust rigid body motion tracking of the head for brain PET

    Noonan, P. J., Anton-Rodriguez, J. M., Cootes, T. F., Hallett, W. A. & Hinz, R., 2013, IEEE Nuclear Science Symposium Conference Record|IEEE Nucl. Sci. Symp. Conf. Rec.. IEEE

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  65. 2012
  66. Published

    Bone marrow lesions in knee osteoarthritis change in 6-12 weeks

    Felson, D. T., Parkes, M. J., Marjanovic, E. J., Callaghan, M., Gait, A., Cootes, T., Lunt, M., Oldham, J. & Hutchinson, C. E., Dec 2012, In : Osteoarthritis and Cartilage. 20, 12, p. 1514-1518 4 p.

    Research output: Contribution to journalArticle

  67. Published

    Real-time facial feature tracking on a mobile device

    Tresadern, P. A., Ionita, M. C. & Cootes, T. F., Feb 2012, In : International Journal of Computer Vision. 96, 3, p. 280-289 9 p.

    Research output: Contribution to journalArticle

  68. Published

    Accurate fully automatic femur segmentation in pelvic radiographs using regression voting.

    Lindner, C., Thiagarajah, S., Wilkinson, J. M., Wallis, G. A., Cootes, T. F. & arcOGEN Consortium , 2012, In : Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention. 15, 3, p. 353-360 7 p.

    Research output: Contribution to journalArticle

  69. Published

    Accurate fully automatic femur segmentation in pelvic radiographs using regression voting.

    Lindner, C., Thiagarajah, S., Wilkinson, J. M., Wallis, G. A., Cootes, T. F. & arcOGEN Consortium , 2012, Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention|Med Image Comput Comput Assist Interv. Springer Nature, Vol. 15. p. 353-360 7 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  70. Published

    Accurate markerless respiratory tracking for gated whole body PET using the Microsoft Kinect

    Noonan, P. J., Howard, J., Tout, D., Armstrong, I., Williams, H. A., Cootes, T. F., Hallett, W. A. & Hinz, R., 2012, IEEE Nuclear Science Symposium Conference Record|IEEE Nucl. Sci. Symp. Conf. Rec.. p. 3973-3974 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  71. Published

    Automatic Construction of Parts+Geometry Models for Initialising Groupwise Registration

    Zhang, P. & Cootes, T. F., 2012, In : IEEE Transactions on Medical Imaging. 31, 2, p. 341-358

    Research output: Contribution to journalArticle

  72. Published

    Realtime markerless rigid body head motion tracking using the Microsoft Kinect

    Noonan, P. J., Howard, J., Cootes, T. F., Hallett, W. A. & Hinz, R., 2012, IEEE Nuclear Science Symposium Conference Record|IEEE Nucl. Sci. Symp. Conf. Rec.. p. 2241-2246 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  73. Published

    Robust and accurate shape model fitting using random forest regression voting

    Cootes, T. F., Ionita, M. C., Lindner, C. & Sauer, P., 2012, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 7578. p. 278-291 13 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  74. Published

    The design and initial calibration of an optical tracking system using the Microsoft Kinect

    Noonan, P. J., Cootes, T. F., Hallett, W. A. & Hinz, R., 2012, IEEE Nuclear Science Symposium Conference Record|IEEE Nucl. Sci. Symp. Conf. Rec.. p. 3614-3617 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  75. 2011
  76. Published

    Accurate regression procedures for active appearance models

    Sauer, P., Cootes, T. & Taylor, C., 2011, BMVC 2011 - Proceedings of the British Machine Vision Conference 2011|BMVC - Proc. Br. Mach. Vis. Conf.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  77. Published

    Automatic Part Selection for Groupwise Registration

    Zhang, P. & Cootes, T. F., 2011, host publication. p. 636-647 12 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  78. Published

    Short-term variability of proximal femur shape in anteroposterior pelvic radiographs

    arcOGEN Consortium , 2011, The 15th Conference on Medical Image Understanding and Analysis (MIUA 2011). BMVA Press, p. 69-73 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  79. 2010
  80. Published

    Building 3-D Statistical Shape Models by Direct Optimization

    Davies, R. H., Twining, C. J., Cootes, T. F. & Taylor, C. J., Apr 2010, In : IEEE Transactions on Medical Imaging. 29, 4, p. 961-981 20 p., 5308401.

    Research output: Contribution to journalArticle

  81. Published

    Additive update predictors in active appearance models

    Tresadern, P. A., Sauer, P. & Cootes, T. F., 2010, British Machine Vision Conference, BMVC 2010 - Proceedings|Br. Mach. Vis. Conf., BMVC - Proc.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  82. Published

    Automatic segmentation of bones and inter-image anatomical correspondence by volumetric statistical modelling of knee MRI

    Williams, T. G., Vincent, G., Bowes, M., Cootes, T., Balamoody, S., Hutchinson, C., Waterton, J. C. & Taylor, C. J., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings|IEEE Int. Symp. Biomed. Imaging: Nano Macro, ISBI - Proc.. IEEE, p. 432-435 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  83. Published

    Building 3D Statistical Shape Models by Direct Optimisation

    Davies, R. H., Twining, C. J., Cootes, T. F. & Taylor, C. J., 2010, In : IEEE Trans. Medical Imaging.

    Research output: Contribution to journalArticle

  84. Published

    Computing accurate correspondences across groups of images

    Cootes, T. F., Twining, C. J., Petrović, V. S., Babalola, K. O. & Taylor, C. J., 2010, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 32, 11, p. 1994-2005 11 p., 5342433.

    Research output: Contribution to journalArticle

  85. Published

    Constructing part-based models for groupwise registration

    Adeshina, S. A. & Cootes, T. F., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings|IEEE Int. Symp. Biomed. Imaging: Nano Macro, ISBI - Proc.. IEEE, p. 1073-1076 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  86. Published

    Image space identification of a motion tracking tool in PET and PET/CT

    Noonan, P. J., Howard, J., Anton-Rodriguez, J., Cootes, T. F., Hallett, W. A. & Hinz, R., 2010, IEEE Nuclear Science Symposium Conference Record|IEEE Nucl. Sci. Symp. Conf. Rec.. p. 2681-2686 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  87. Published

    Improved 3D model search for facial feature location and pose estimation in 2D images

    Caunce, A., Taylor, C. & Cootes, T., 2010, British Machine Vision Conference, BMVC 2010 - Proceedings|Br. Mach. Vis. Conf., BMVC - Proc.. BMVA Press, 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  88. Published

    Using parts and geometry models to initialise active appearance models for automated segmentation of 3D medical images

    Babalola, K. & Cootes, T., 2010, 2010 7th IEEE International Symposium on Biomedical Imaging: From Nano to Macro, ISBI 2010 - Proceedings|IEEE Int. Symp. Biomed. Imaging: Nano Macro, ISBI - Proc.. IEEE, p. 1069-1072 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  89. 2009
  90. Published

    An evaluation of four automatic methods of segmenting the subcortical structures in the brain

    Babalola, K. O., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., Smith, S., Cootes, T., Jenkinson, M. & Rueckert, D., 1 Oct 2009, In : NeuroImage. 47, 4, p. 1435-1447 12 p.

    Research output: Contribution to journalArticle

  91. Published

    Combining local and global shape models for deformable object matching

    Tresadern, P. A., Bhaskar, H., Adeshina, S. A., Taylor, C. J. & Cootes, T. F., 2009, British Machine Vision Conference, BMVC 2009 - Proceedings|Br. Mach. Vis. Conf., BMVC - Proc.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  92. Published

    Evaluating different structures for predicting skeletal maturity using statistical appearance models

    Adeshina, S. A., Cootes, T. F. & Adams, J. E., 2009, Medical Image Understanding and Analysis.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  93. Published

    Locating facial features and pose estimation using a 3D shape model

    Caunce, A., Cristinacce, D., Taylor, C. & Cootes, T., 2009, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Springer Nature, Vol. 5875. p. 750-761 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  94. Published

    Segmentation of lumbar vertebrae using part-based graphs and active appearance models

    Roberts, M. G., Cootes, T. F. & Adams, J., 2009, MICCAI. Springer Nature, p. 1017-1024 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  95. 2008
  96. Published

    Automatic feature localisation with constrained local models

    Cristinacce, D. & Cootes, T., Oct 2008, In : Pattern Recognition. 41, 10, p. 3054-3067 13 p.

    Research output: Contribution to journalArticle

  97. Published

    3D brain segmentation using active appearance models and local regressors.

    Babalola, K., Cootes, TF., Twining, C., Petrovic, V. & Taylor, C., 2008, Med Image Comput Comput Assist Interv. Germany: Springer Nature, Vol. 11( Pt 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  98. Published

    Comparison and evaluation of segmentation techniques for subcortical structures in brain MRI.

    Babalola, K., Patenaude, B., Aljabar, P., Schnabel, J., Kennedy, D., Crum, W., Smith, S., Cootes, TF., Jenkinson, M. & Rueckert, D., 2008, Med Image Comput Comput Assist Interv Int Conf. Germany, Vol. 11( Pt 1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  99. Published

    Facial Motion Analysis using Clustered Shortest Path Tree Registration

    Cristinacce, D. & Cootes, TF., 2008, MLVMA Workshop (ECCV).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  100. 2007
  101. Published

    Texture enhanced appearance models

    Larsen, R., Stegmann, M. B., Darkner, S., Forchhammer, S., Cootes, T. F. & Kjær Ersbøll, B., Apr 2007, In : Computer Vision and Image Understanding. 106, 1, p. 20-30 10 p.

    Research output: Contribution to journalArticle

  102. Published

    Automated analysis of deformable structure in groups of images

    Petrovic, V., Cootes, T., Twining, C., Mills, A. & Taylor, C., 2007, BMVC 2007 - Proceedings of the British Machine Vision Conference 2007|BMVC - Proc. Br. Mach. Vis. Conf.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  103. Published

    Boosted regression active shape models

    Cristinacce, D. & Cootes, T., 2007, BMVC 2007 - Proceedings of the British Machine Vision Conference 2007|BMVC - Proc. Br. Mach. Vis. Conf.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  104. Published

    Robust active appearance models with iteratively rescaled Kernels

    Roberts, M. G., Cootes, T. F. & Adams, J. E., 2007, BMVC 2007 - Proceedings of the British Machine Vision Conference 2007|BMVC - Proc. Br. Mach. Vis. Conf.. BMVA Press

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  105. Published

    Simultaneous registration, segmentation and modelling of structure in groups of medical images

    Petrović, V., Cootes, T., Twining, C., Taylor, C. & Petrovic, V., 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings|IEEE Int. Symp. Biomed. Imag. Nano Macro Proc.. IEEE, p. 1-4 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  106. Published

    Simultaneous Segmentation of Groups of Medical Images

    Petrovic, VS., Cootes, TF., Mills, A. M. & Taylor, CJ., 2007, Proc. MIUA. p. 1-5 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  107. 2006
  108. Published

    Prostate Segmentation in MR Images using 3D Shape Model Constratined Voxel Classificattion

    Graham, J. (ed.), Thacker, N. (ed.) & Cootes, T. (ed.), Jul 2006, Proceedings of Medical Image Understanding and Analysis. Graham, J., Thacker, N. & Cootes, T. (eds.). Manchester, UK: BMVA Press, p. 166-170 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  109. Published

    An algorithm for tuning an active appearance model to new data

    Cootes, T. F. & Taylor, C. J., 2006, BMVC 2006 - Proceedings of the British Machine Vision Conference 2006|BMVC - Proc. Br. Mach. Vis. Conf.. BMVA Press, p. 919-928 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  110. Published

    Assessing the accuracy of non-rigid registration with and without ground truth

    Schestowitz, R., Twining, C. J., Cootes, T., Petrović, V., Taylor, C. J., Crum, W. R. & Petrovic, V., 2006, 2006 3rd IEEE International Symposium on Biomedical Imaging: From Nano to Macro - Proceedings|IEEE Int. Symp. Biomed. Imag. Nano Macro Proc.. IEEE, Vol. 2006. p. 836-839 3 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  111. Published

    Automatic Framework for Medical Image Registration, Segmentation and Modeling

    Petrovic, V. S., Cootes, T. F., Twining, C. J. & Taylor, C., 2006, Medical Image Understanding and Analysis. p. 141-145 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  112. Published

    Automatic segmentaton of lumbar vertebrae on digitised radiographs using linked Active Appearance Models

    Roberts, M., Cootes, TF. & Adams, JE., 2006, In Proc. of MIUA Conference.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  113. Published

    Comparing the similarity of statistical shape models using the Bhattacharya metric.

    Babalola, K., Cootes, TF., Patenaude, B., Rao, A. & Jenkinson, M., 2006, Med Image Comput Comput Assist Interv Int (MICCAI). Germany, Vol. 9( Pt 1). p. 142-150 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  114. Published

    Facial feature detection and tracking with automatic template selection

    Cristinacce, D. & Cootes, T. F., 2006, FGR 2006: Proceedings of the 7th International Conference on Automatic Face and Gesture Recognition|Proc. Int. Conf. Autom. Face Gesture Recog.. Vol. 2006. p. 429-434 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

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