Prof Sophia Ananiadou

Chair in Computer Science

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Publications

  1. 2019
  2. E-pub ahead of print

    Mapping anatomical related entities to human body parts based on wikipedia in discharge summaries

    Wang, Y., Fan, X., Chen, L., Chang, E. I., Ananiadou, S., Tsujii, J. & Xu, Y., 17 Aug 2019, In : BMC Bioinformatics. 20, 1

    Research output: Contribution to journalArticle

  3. Published

    Adverse Drug Events and Medication Relation Extraction in EHRs with Ensemble Deep Learning Methods

    Christopoulou, F., Tran, T., Sahu, S., Miwa, M. & Ananiadou, S., 7 Aug 2019, In : Journal of the American Medical Informatics Association.

    Research output: Contribution to journalArticle

  4. Published

    Improving classification of Adverse Drug Reactions through Using Sentiment Analysis and Transfer Learning

    Alhuzali, H. & Ananiadou, S., 1 Jul 2019, Improving classification of Adverse Drug Reactions through Using Sentiment Analysis and Transfer Learning. p. 339 347 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  5. Published

    A Text Mining Pipeline Using Active and Deep Learning for Curating Information in Computational Neuroscience

    Shardlow, M., Ju, M., Li, M., O'Reilly, C., Iavarone, E., McNaught, J. & Ananiadou, S., Jul 2019, In : Neuroinformatics. 17, 3, p. 391-406 16 p.

    Research output: Contribution to journalArticle

  6. Published

    Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network

    Sahu, S., Christopoulou, E., Miwa, M. & Ananiadou, S., Jul 2019, Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network. p. 4309-4316 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  7. Published

    An Ensemble of Neural Models for Nested Adverse Drug Events and Medication Extraction with Subwords

    Ju, M., Nguyen, N., Miwa, M. & Ananiadou, S., 14 Jun 2019, In : Journal of the American Medical Informatics Association.

    Research output: Contribution to journalArticle

  8. Published

    Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks

    Li, M., Fahlström Myrman, A., Mu, T. & Ananiadou, S., Jun 2019, Modelling Instance-Level Annotator Reliability for Natural Language Labelling Tasks. p. 2873-2883 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  9. Published

    Annotating and Detecting Phenotypic Information for Chronic Obstructive Pulmonary Disease

    Ju, M., Short, A., Thompson, P., Diar Bakerly, N., Gkoutos, G., Tsaprouni, L. & Ananiadou, S., 26 Apr 2019, In : Journal of the American Medical Informatics Association.

    Research output: Contribution to journalArticle

  10. Published

    Hypothesis, analysis and synthesis, it's all Greek to me

    Iliopoulos, I., Ananiadou, S., Danchin, A., Ioannidis, J. P., Katsikis, P. D., Ouzounis, C. A. & Promponas, V. J., 2019, In : eLife. 8

    Research output: Contribution to journalArticle

  11. Published
  12. Published

    Machine learning algorithms for systematic review: Reducing workload in a preclinical review of animal studies and reducing human screening error

    Bannach-Brown, A., Przybyła, P., Thomas, J., Rice, A. S. C., Ananiadou, S., Liao, J. & Macleod, M. R., 2019, In : Systematic Reviews. 8, 1, 23.

    Research output: Contribution to journalReview article

  13. Published

    Quantifying Risk Factors in Medical Reports with a Context-Aware Linear Model

    Przybyla, P., Brockmeier, A. & Ananiadou, S., 2019, In : Journal of the American Medical Informatics Association.

    Research output: Contribution to journalArticle

  14. 2018
  15. Published

    Improve Chinese Clinical Named Entity Recognition Performance by Using the Graphical and Phonetic Feature

    Tsujii, J., Ananiadou, S. & Wang, Y., 3 Dec 2018, Proceedings of BIBM 2018 (IEEE). p. 1582-1586 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  16. Published

    Prioritising references for systematic reviews with RobotAnalyst: a user study

    Przybyła, P., Brockmeier, A., Kontonatsios, G., Le Pogam, M-A., McNaught, J., von Elm, E., Nolan, K. & Ananiadou, S., 25 Sep 2018, In : Research Synthesis Methods. 9, 3, p. 470-488

    Research output: Contribution to journalArticle

  17. Published

    Investigating Domain-Specific Information for Neural Coreference Resolution on Biomedical Texts

    Trieu, H-L., Nguyen, N., Miwa, M. & Ananiadou, S., 19 Jul 2018, Proceedings of the BioNLP 2018 workshop . p. 183-188 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  18. Published

    Biosimilar vs originator insulins: Systematic review and meta-analysis

    Yamada, T., Kamata, R., Ishinohachi, K., Shojima, N., Ananiadou, S., Nom, H., Yamauchi, T. & Kadowaki, T., 1 Jul 2018, In : Diabetes, Obesity and Metabolism. 20, 7, p. 1787-1792

    Research output: Contribution to journalArticle

  19. Published

    Identification of research hypotheses and new knowledge from scientific literature

    Shardlow, M., Batista-Navarro, R. T., Thompson, P., McNaught, J. & Ananiadou, S., 25 Jun 2018, In : BMC Medical Informatics and Decision Making. 18, 13 p., 46.

    Research output: Contribution to journalArticle

  20. Published

    Paths for uncertainty: Exploring the intricacies of uncertainty identification for news

    Zerva, C. & Ananiadou, S., 5 Jun 2018, Proceedings of the NAACL Workshop on Computational Semantics Beyond Events and Roles (SemBEaR). p. 6-20 15 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  21. Published

    Extracting Gene-Disease Relations from Text to Support Biomarker Discovery

    Thompson, P. & Ananiadou, S., 2 Jun 2018, Digital Health 2017: Global Public Health, Personalised Medicine, and Emergency Medicine in the Age of Big Data. ACM Digital Library

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  22. Published

    A Neural Layered Model for Nested Named Entity Recognition

    Ju, M., Miwa, M. & Ananiadou, S., 1 Jun 2018, Proceedings of NAACL 2018. p. 1446-1459 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  23. Published

    A New Corpus to Support Text Mining for the Curation of Metabolites in the ChEBI Database

    Shardlow, M., Nguyen, N., Owen, G., Turner, S., Leach, A., O'Donovan, C., McNaught, J. & Ananiadou, S., May 2018, p. 280-285. 6 p.

    Research output: Contribution to conferencePaper

  24. Published

    LitPathExplorer: A Confidence-based Visual Text Analytics Tool for Exploring Literature-Enriched Pathway Models

    Soto, A., Zerva, C., Batista-Navarro, R. T. & Ananiadou, S., 15 Apr 2018, In : Bioinformatics. 34, 8, p. 1389-1397

    Research output: Contribution to journalArticle

  25. Published

    On Revolutions

    Leroi, A. M., Lambert, B. C., Mauch, M., Papadopoulou, M., Ananiadou, S., Lindberg, S. I. I. & Lindenfors, P., 15 Mar 2018, In : SSRN Working Paper Series. 63.

    Research output: Contribution to journalArticle

  26. Published

    Self-Tuned Descriptive Document Clustering using a Predictive Network

    Brockmeier, A., Mu, T., Ananiadou, S. & Goulermas, J. Y., 23 Feb 2018, In : IEEE Transactions on Knowledge and Data Engineering.

    Research output: Contribution to journalArticle

  27. Published

    Annotation and Detection of Drug Effects in Text for Pharmacovigilance

    Thompson, P., Daikou, S., Ueno, K., Batista-Navarro, R. T., Tsujii, J. & Ananiadou, S., 2018, In : Journal of Cheminformatics. 10

    Research output: Contribution to journalArticle

  28. Published

    HYPHEN: A flexible, hybrid method to map phenotype concept mentions to terminological resources

    Thompson, P. & Ananiadou, S., 2018, In : Terminology. 24, 1, p. 91-121

    Research output: Contribution to journalArticle

  29. Published

    Thalia: Semantic search engine for biomedical abstracts

    Soto, A., Przybyla, P. & Ananiadou, S., 2018, In : Bioinformatics.

    Research output: Contribution to journalArticle

  30. 2017
  31. Published

    Identifying Personalised Treatments and Clinical Trials for Precision Medicine using Semantic Search with Thalia

    Przybyła, P., Soto, A. & Ananiadou, S., Nov 2017, Proceedings of the Twenty-Fifth Text REtrieval Conference (TREC 2017).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  32. Published

    Risk of bias reporting in the recent animal focal cerebral ischaemia literature

    Bahor, Z., Liao, J., Macleod, M., Bannach-brown, A., Mccann, S., Wever, K., Thomas, J., Ottavi, T., Howells, D., Rice, A., Ananiadou, S. & Sena, E., 15 Oct 2017, In : Clinical Science. 131, 20, p. 2525-2532

    Research output: Contribution to journalArticle

  33. Published

    Proactive Learning for Named Entity Recognition

    Li, M., Nguyen, N. & Ananiadou, S., Aug 2017, Proceedings of BioNLP 2017. p. 117-125 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  34. Published

    Using uncertainty to link and rank evidence from biomedical literature for model curation

    Zerva, C., Batista-Navarro, R. T., Day, P. & Ananiadou, S., 24 Jul 2017, In : Bioinformatics.

    Research output: Contribution to journalArticle

  35. Published

    Quantifying the Informativeness of Similarity Measurements

    Brockmeier, A., Mu, T., Ananiadou, S. & Goulermas, J. Y., 7 Jul 2017, In : Journal of Machine Learning Research.

    Research output: Contribution to journalArticle

  36. Published

    Data Visualization with Structural Control of Global Cohort and Local Data Neighborhoods

    Mu, T., Goulermas, J. Y. & Ananiadou, S., 15 Jun 2017, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. PP, 99

    Research output: Contribution to journalArticle

  37. Published

    Enriching News Events with Meta-knowledge Information

    Thompson, P., Nawaz, R., McNaught, J. & Ananiadou, S., Jun 2017, In : Language Resources and Evaluation. 51, 2, p. 409-438 30 p.

    Research output: Contribution to journalArticle

  38. Published

    Supporting Biological Pathway Curation Through Text Mining

    Ananiadou, S. & Thompson, P., 23 Apr 2017, In : Communications in Computer and Information Science. p. 59-73 15 p.

    Research output: Contribution to journalArticle

  39. Published

    Constructing a biodiversity terminological inventory

    Nguyen, N., Soto, A., Kontonatsios, G., Batista-Navarro, R. T. & Ananiadou, S., 17 Apr 2017, In : PLoS ONE. p. 1-23 23 p.

    Research output: Contribution to journalArticle

  40. Published

    A Text Mining-Based Framework for Constructing an RDF-Compliant Biodiversity Knowledge Repository

    Batista-navarro, R., Zerva, C., Nguyen, N. T. H. & Ananiadou, S., 8 Mar 2017, Communications in Computer and Information Science . p. 30-42 13 p. (Information Management and Big Data).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  41. Accepted/In press

    5Ws: What Went Wrong With Word embeddings

    Espinosa, K. J., Batista-Navarro, R. T. & Ananiadou, S., 2017, (Accepted/In press).

    Research output: Contribution to conferencePaper

  42. Published

    A semi-supervised approach using label propagation to support citation screening

    Kontonatsios, G., Brockmeier, A., Przybyla, P., McNaught, J., Mu, T., Goulermas, J. Y. & Ananiadou, S., 2017, In : Journal of Biomedical Informatics.

    Research output: Contribution to journalArticle

  43. Published

    biochem4j: integrated and extensible biochemical knowledge through graph databases

    Swainston, N., Batista-Navarro, R. T., Carbonell, P., Dobson, P., Dunstan, M., Jervis, A., Vinaixa, M., Williams, A., Ananiadou, S., Faulon, J-L., Pedrosa Mendes, P., Kell, D., Scrutton, N. & Breitling, R., 2017, In : PLoS ONE. 12, 7, e0179130.

    Research output: Contribution to journalArticle

  44. Published

    Distributed document and phrase co-embeddings for descriptive clustering

    Tsujii, J., Sato, M., Brockmeier, A., Kontonatsios, G., Mu, T. & Ananiadou, S., 2017, Proceedings of EACL 2017. p. 991-1001 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  45. Accepted/In press

    Distributed Document and Phrase Co-embeddings for Descriptive Clustering

    Sato, M., Brockmeier, A., Kontonatsios, G., Mu, T., Goulermas, J., Tsujii, J. & Ananiadou, S., 2017, (Accepted/In press) p. 991-1001. 11 p.

    Research output: Contribution to conferencePaper

  46. Published

    Role of in silico tools and text mining in the safety assessment of selected plant coumarins

    Raitano, G., Benfenati, E., Ananiadou, S., Fu, X., Do, Q. T., Rat, P. & Sousselier, L., 2017, In : Toxicology Letters. 280, p. S96

    Research output: Contribution to journalArticle

  47. 2016
  48. Published

    Mapping Phenotypic Information in Heterogeneous Textual Sources to a Domain- Specific Terminological Resource

    Alnazzawi, N., Thompson, P. & Ananiadou, S., 19 Sep 2016, In : PLoS One.. 11, 9, e0162287.

    Research output: Contribution to journalArticle

  49. Published

    Overview of the interactive task in BioCreative V

    Wang, Q., Abdul, S. S., Almeida, L., Ananiadou, S., Balderas-Martínez, Y. I., Batista-Navarro, R., Campos, D., Chilton, L., Chou, H. J., Contreras, G., Cooper, L., Dai, H. J., Ferrell, B., Fluck, J., Gama-Castro, S., George, N., Gkoutos, G., Irin, A. K., Jensen, L. J., Jimenez, S. & 36 others, Jue, T. R., Keseler, I., Madan, S., Matos, S., McQuilton, P., Milacic, M., Mort, M., Natarajan, J., Pafilis, E., Pereira, E., Rao, S., Rinaldi, F., Rothfels, K., Salgado, D., Silva, R. M., Singh, O., Stefancsik, R., Su, C. H., Subramani, S., Tadepally, H. D., Tsaprouni, L., Vasilevsky, N., Wang, X., Chatr-Aryamontri, A., Laulederkind, S. J. F., Matis-Mitchell, S., McEntyre, J., Orchard, S., Pundir, S., Rodriguez-Esteban, R., Van Auken, K., Lu, Z., Schaeffer, M., Wu, C. H., Hirschman, L. & Arighi, C. N., 1 Sep 2016, In : Database. 2016, baw119.

    Research output: Contribution to journalArticle

  50. Published

    A text mining framework for accelerating the semantic curation of literature

    Batista-Navarro, R., Hammock, J., Ulate, W. & Ananiadou, S., 10 Aug 2016, Research and Advanced Technology for Digital Libraries : 20th International Conference on Theory and Practice of Digital Libraries, TPDL 2016 Hannover, Germany, September 5-9, 2016 proceedings. Springer Nature, p. 459-462 4 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 9819).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  51. Published

    Text Mining Workflows for Indexing Archives with Automatically Extracted Semantic Metadata

    Batista-Navarro, R. T., Soto, A., Ulate, W. & Ananiadou, S., 10 Aug 2016, p. 471-473.

    Research output: Contribution to conferenceOther

  52. Published

    Analysis of the effect of sentiment analysis on extracting adverse drug reactions from tweets and forum posts

    Korkontzelos, I., Azadeh Nikfarjamb, Shardlow, M., Sarkerb, A., Ananiadou, S. & Graciela H. Gonzalez, Aug 2016, In : Journal of Biomedical Informatics. 62, p. 148–158

    Research output: Contribution to journalArticle

  53. Published

    Topic Detection Using Paragraph Vectors to Support Active Learning in Systematic Reviews

    Hashimoto, K., Kontonatsios, G., Miwa, M. & Ananiadou, S., Aug 2016, In : Journal of Biomedical Informatics. 62, p. 59–65

    Research output: Contribution to journalArticle

  54. Published

    Text Mining for Semantic Search in Europe PubMed Central Labs

    Black, W., Rowley, A., Miwa, M., McNaught, J. & Ananiadou, S., 12 Jul 2016, Working with Text: Tools, Techniques and Approaches for Text Mining. Tonkin, E. & Tourte, G. (eds.). Cambridge: Chandos, p. 111-131 (Chandos Information Professional Series).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  55. Published

    The strategic impact of META-NET on the regional, national and international level

    Rehm, G., Uszkoreit, H., Garabik, R., Grobelnik, M., García-Mateo, C., van Genabith, J., Hajič, J., Hernáez, I., Judge, J., Koeva, S., Krek, S., Krstev, C., Ananiadou, S., Lindén, K., Magnini, B., Mariani, J., McNaught, J., Melero, M., Monachini, M., Moreno, A. & 24 others, Odijk, J., Ogrodniczuk, M., Pęzik, P., Bel, N., Piperidis, S., Przepiórkowski, A., Rögnvaldsson, E., Rosner, M., Pedersen, B. S., Skadiņa, I., De Smedt, K., Tadíc, M., Thompson, P., Tufiș, D., Bielevičiené, A., Váradi, T., Vasiļjevs, A., Vider, K., Zabarskaitė, J., Borin, L., Branco, A., Budin, G., Calzolari, N. & Daelemans, W., Jun 2016, In : Language Resources and Evaluation. 50, 2, p. 351-374 24 p.

    Research output: Contribution to journalArticle

  56. Published

    Argo: Enabling the development of bespoke workflows and services for disease annotation

    Batista-Navarro, R. T., Carter, J. & Ananiadou, S., 11 Apr 2016, In : Database: The Journal of Biological Databases and Curation.

    Research output: Contribution to journalArticle

  57. Published

    Customised OCR correction for historical medical text

    Thompson, P., McNaught, J. & Ananiadou, S., Mar 2016, 2015 Digital Heritage. Guidi, G., Scopigno, R., Torres, J. C. & Graf, H. (eds.). IEEE, Vol. 1. p. 35-41 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  58. Published

    Semantically enhanced search system for historical medical archives

    Thompson, P., Carter, J., McNaught, J. & Ananiadou, S., Mar 2016, 2015 Digital Heritage. Guidi, G., Scopigno, R., Torres, J. C. & Graf, H. (eds.). IEEE, Vol. 2. p. 387-390 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  59. Published

    Text mining the history of medicine

    Thompson, P., Batista-Navarro, R. T., Kontonatsios, G., Carter, J., Toon, E., McNaught, J., Timmermann, C., Worboys, M. & Ananiadou, S., 6 Jan 2016, In : P L o S One. 11, 1, 33 p., e0144717.

    Research output: Contribution to journalArticle

  60. Published

    BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID

    Kim, S., Islamaj Doğan, R., Chatr-Aryamontri, A., Chang, C. S., Oughtred, R., Rust, J., Batista-Navarro, R., Carter, J., Ananiadou, S., Matos, S., Santos, A., Campos, D., Oliveira, J. L., Singh, O., Jonnagaddala, J., Dai, H. J., Su, E. C. Y., Chang, Y. C., Su, Y. C., Chu, C. H. & 15 others, Chen, C. C., Hsu, W. L., Peng, Y., Arighi, C., Wu, C. H., Vijay-Shanker, K., Aydın, F., Hüsünbeyi, Z. M., Özgür, A., Shin, S. Y., Kwon, D., Dolinski, K., Tyers, M., Wilbur, W. J. & Comeau, D. C., 2016, In : Database : the journal of biological databases and curation. 2016

    Research output: Contribution to journalArticle

  61. Published

    Facilitating and promoting web annotation with Argo

    Shardlow, M., Przybyla, P., Batista-Navarro, R. T., Carter, J., McNaught, J. & Ananiadou, S., 2016, Proceedings of I Annotate 2016.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  62. Published

    Learning to recognise named entities in tweets by exploiting weakly labelled data

    Espinosa, K. J., Batista-Navarro, R. T. & Ananiadou, S., 2016.

    Research output: Contribution to conferencePoster

  63. Published

    NaCTeM at SemEval-2016 Task 1: Inferring sentence-level semantic similarity from an ensemble of complementary lexical and sentence-level features

    Przybyla, P., Nguyen, N., Shardlow, M., Kontonatsios, G. & Ananiadou, S., 2016, Proceedings of the 10th International Workshop on Semantic Evaluation .

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  64. Published

    Text Mining Resources for the Life Sciences

    Przybyla, P., Shardlow, M., Aubin, S., Bossy, R., Eckart de Castilho, R., Piperidis, S., McNaught, J. & Ananiadou, S., 2016, In : Database. 2016, 30 p.

    Research output: Contribution to journalArticle

  65. 2015
  66. Published

    Supporting Systematic Reviews Using LDA-based Document Representations

    Mo, Y., Kontonatsios, G. & Ananiadou, S., Nov 2015, In : Systematic Reviews. 24, 6

    Research output: Contribution to journalArticle

  67. Published

    Boosting Drug Named Entity Recognition Using an Aggregate Classifier

    Korkontzelos, I., Piliouras, D., Dowsey, AW. & Ananiadou, S., Oct 2015, In : Artificial Intelligence in Medicine. 65, 2, p. 145–153 9 p.

    Research output: Contribution to journalArticle

  68. Published

    Event Extraction in pieces: tackling the partial event identification problem on unseen corpora

    Ananiadou, S., Kevin, C. (ed.), Dina, D-F. (ed.), Ananiadou, S. (ed.) & Jun-ichi, T. (ed.), 31 Jul 2015, Biomedical Natural Language Processing. Kevin, C., Dina, D-F., Sophia, A. & Jun-ichi, T. (eds.). Association for Computational Linguistics, p. 31-41 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  69. Published

    Adaptable, High Recall, Event Extraction System with Minimal Configuration

    Miwa, M. & Ananiadou, S., 13 Jul 2015, In : B M C Bioinformatics. 16, 10:S7, PMID: 26201408.

    Research output: Contribution to journalArticle

  70. Published

    Overview of the Cancer Genetics and Pathway Curation tasks of BioNLP Shared Task 2013

    Pyysalo, S., Ohta, T., Rak, R., Rowley, A., Chun, H. W., Jung, S. J., Choi, S. P., Tsujii, J. & Ananiadou, S., 23 Jun 2015, In : BMC Bioinformatics. 16, 10, S2.

    Research output: Contribution to journalArticle

  71. Published

    Using text mining techniques to extract phenotypic information from the PhenoCHF corpus

    Alnazzawi, N., Thompson, P., Batista-Navarro, R. T. & Ananiadou, S., 15 Jun 2015, In : B M C Medical Informatics and Decision Making. 15, Suppl 2

    Research output: Contribution to journalArticle

  72. Published

    A Cross-lingual Similarity Measure for Detecting Biomedical Term Translations

    Bollegala, D., Kontonatsios, G. & Ananiadou, S., 1 Jun 2015, In : P L o S One. 10, 6, e0126196.

    Research output: Contribution to journalArticle

  73. Published

    Event-based text mining for biology and functional genomics

    Ananiadou, S., Thompson, P., Nawaz, R., McNaught, J. & Kell, D., May 2015, In : Briefings in functional genomics. 14, 3, p. 213-30 17 p.

    Research output: Contribution to journalArticle

  74. Published

    Optimising chemical named entity recognition with pre-processing analytics, knowledge-rich features and heuristics

    Batista-Navarro, R., Rak, R. & Ananiadou, S., 19 Jan 2015, In : Journal of Cheminformatics. 7, (Suppl 1): S6, 13 p.

    Research output: Contribution to journalArticle

  75. Published

    Using text mining for study identification in systematic reviews: a systematic review of current approaches

    O'Mara-Eves, A., Thomas, J., McNaught, J., Miwa, M. & Ananiadou, S., 14 Jan 2015, In : Systematic Reviews. 4, 5

    Research output: Contribution to journalArticle

  76. Published

    Adapting ChER for the recognition of chemical mentions in patents

    Batista-Navarro, R. T. & Ananiadou, S., 2015, Proceedings of the Fifth BioCreative Challenge Evaluation Workshop. Seville, Spain, p. 149-153

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  77. Published

    Augmenting the Medical Subject Headings vocabulary with semantically rich variants to improve disease mention normalisation

    Batista-Navarro, R. T. & Ananiadou, S., 2015, Proceedings of the Fifth BioCreative Challenge Evaluation Workshop. Seville, Spain, p. 311-316

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  78. Published

    Bilingual term alignment from comparable corpora in English discharge summary and Chinese discharge summary

    Xu, Y., Chen, L., Wei, J., Ananiadou, S., Fan, Y., Qian, Y., Chang, E. I-C. & Tsujii, J., 2015, In : B M C Bioinformatics. 16, 149.

    Research output: Contribution to journalArticle

  79. Published

    Bridging text-mined biomolecular events to pathway models using approximate subgraph matching techniques

    Batista-Navarro, R. T., Nawaz, R., Zerva, C. & Ananiadou, S., 2015, Proceedings of the 16th International Conference on Systems Biology, Singapore.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  80. Published

    Development of bespoke machine learning and biocuration workflows in a BioC-supporting text mining workbench.

    Batista-Navarro, R. T., Carter, J. & Ananiadou, S., 2015, Proceedings of the Fifth BioCreative Challenge Evaluation Workshop. Seville, Spain, p. 51-56

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  81. Published

    Extending a Tool Resource Framework with U-Compare

    Rosner, M., Attard, A., Thompson, P., Gatt, A. & Ananiadou, S., 2015, Human Language Technology Challenges for Computer Science and Linguistics. Springer Nature, Vol. 8387. p. 315-326 12 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  82. Published

    Mining the biomedical literature

    Mihaila, C., Batista-Navarro, R. T., Alnazzawi, N., Kontonatsios, G., Korkontzelos, I., Rak, R., Thompson, P. & Ananiadou, S., 2015, Healthcare Data Analytics. CRC Press, p. 251-308

    Research output: Chapter in Book/Report/Conference proceedingChapter

  83. Published

    Semi-automatic curation of chronic obstructive pulmonary disease phenotypes using Argo.

    Batista-Navarro, R. T., Carter, J. & Ananiadou, S., 2015, Proceedings of the Fifth BioCreative Challenge Evaluation Workshop. Seville, Spain, p. 406-408

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  84. Published

    Supporting the annotation of chronic obstructive pulmonary disease (COPD) phenotypes with text mining workflows

    Fu, X., Batista-Navarro, R. T., Rak, R. & Ananiadou, S., 2015, In : Journal of Biomedical Semantics. 6, 8

    Research output: Contribution to journalArticle

  85. Published

    Unlocking knowledge in biodiversity legacy literature through automatic semantic metadata extraction.

    Batista-Navarro, R. T., Ulate, W., Hammock, J., Kontonatsios, G., Rose-Sandler, T. & Ananiadou, S., 2015, Proceedings of the TDWG 2015 Annual Conference.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  86. 2014
  87. Published

    Descriptive Document Clustering via Discriminant Learning in a Co-Embedded Space of Multilevel Similarities

    Mu, T., Goulermas, J. Y., Korkontzelos, I. & Ananiadou, S., 3 Dec 2014, In : Journal of the Association for Information Science and Technology. 67, 1, p. 106-133

    Research output: Contribution to journalArticle

  88. Published

    Semi-supervised learning of causal relations in biomedical scientific discourse

    Mihaila, C., Mihăilă, C. & Ananiadou, S., Dec 2014, In : BioMedical Engineering OnLine. 13, Suppl 2

    Research output: Contribution to journalArticle

  89. Published

    Europe PMC: a full-text literature database for the life sciences and platform for innovation

    Gou, Y., Graff, F., Rossiter, P., Talo, F., Vartak, V., Coleman, L-A., Hawkins, C., Kinsey, A., Mansoor, S., Morris, V., Rowbotham, R., Chapman, D., Kilian, O., MacIntyre, R., Patel, Y., Ananiadou, S., Black, W., McNaught, J., Rak, R., Rowley, A. & 7 others, Kafkas, S., Katuri, J., Kim, J-H., Marinos, N., McEntyre, J., Morrison, A. & Pi, X., 6 Nov 2014, In : Nucleic acids research. p. 1-7 7 p.

    Research output: Contribution to journalArticle

  90. Published

    A hybrid approach to compiling bilingual dictionaries of medical terms from parallel corpora

    Kontonatsios, G., Mihaila, C., Korkontzelos, I., Thompson, P. & Ananiadou, S., Oct 2014, Statistical Language and Speech Processing. Springer Nature, p. 57-69 13 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  91. Published

    Combining String and Context Similarity for Bilingual Term Alignment from Comparable Corpora

    Kontonatsios, G., Korkontzelos, I., Tsujii, J. & Ananiadou, S., Oct 2014, Proceedings of the 2014 Conference on Empirical Methods in Natural Language Processing (EMNLP). Association for Computational Linguistics, p. 1701-1712 12 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  92. Published

    Text Mining-assisted Biocuration Workflows in Argo

    Rak, R., Batista-Navarro, R. T., Rowley, A., Carter, J. & Ananiadou, S., 18 Jul 2014, In : Database. p. 1–14

    Research output: Contribution to journalArticle

  93. Published

    Improving the Extraction of Clinical Concepts from Clinical Records

    Fu, X. & Ananiadou, S., May 2014, Proceedings of the 4th Workshop on Building and Evaluating Resources for Health and Biomedical Text Processing. Reykjavik, Iceland: European Language Resources Association

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  94. Published

    Interoperability and Customisation of Annotation Schemata in Argo

    Rak, R., Rowley, A., Carter, J., Batista-Navarro, R. T. & Ananiadou, S., May 2014, Proceedings of the Ninth International Conference on Language Resources and Evaluation (LREC'14). European Language Resources Association, p. 3837-3842 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  95. Published

    Locating Requests among Open Source Software Communication Messages

    Korkontzelos, I. & Ananiadou, S., May 2014, Proceedings of the Ninth International Conference on Language Resources and Evaluation (LREC'14). European Language Resources Association, p. 1347-1354 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  96. Published

    The Meta-knowledge of Causality in Biomedical Scientific Discourse

    Mihaila, C. & Ananiadou, S., May 2014, Proceedings of the Ninth International Conference on Language Resources and Evaluation (LREC'14). European Language Resources Association, p. 1984-1991 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  97. Published

    The Strategic Impact of META-NET on the Regional, National and International Level

    Rehm, G., Uszkoreit, H., Ananiadou, S., Bel, N., Bielevičiené, A., Borin, L., Branco, A., Budin, G., Calzolari, N., Daelemans, W., Garabik, R., Grobelnik, M., García-Mateo, C., van Genabith, J., Hajič, J., Hernáez, I., Judge, J., Koeva, S., Krek, S., Krstev, C. & 24 others, Lindén, K., Magnini, B., Mariani, J., McNaught, J., Melero, M., Monachini, M., Moreno, A., Odijk, J., Ogrodniczuk, M., Pęzik, P., Piperidis, S., Przepiórkowski, A., Rögnvaldsson, E., Rosner, M., Pedersen, B. S., Skadiņa, I., De Smedt, K., Tadíc, M., Thompson, P., Tufiș, D., Váradi, T., Vasiļjevs, A., Vider, K. & Zabarskaitė, J., May 2014, Proceedings of the Ninth International Conference on Language Resources and Evaluation (LREC'14). Calzolari, N., Choukri, K., Declerck, T., Loftsson, H., Maegaard, B., Mariani, J. & Moreno, A. (eds.). European Language Resources Association, p. 1517-1524 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  98. Published

    Building a semantically annotated corpus for congestive heart and renal failure from clinical records and the literature

    Alnazzawi, N., Thompson, P. & Ananiadou, S., Apr 2014, Proceedings of the 5th International Workshop on Health Text Mining and Information Analysis (Louhi). Association for Computational Linguistics, p. 69-74 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  99. Published

    Using a Random Forest Classifier to Compile Bilingual Dictionaries of Technical Terms from Comparable Corpora

    Kontonatsios, G., Korkontzelos, I., Tsujii, J. & Ananiadou, S., Apr 2014, Proceedings of the 14th Conference of the European Chapter of the Association for Computational Linguistics, volume 2: Short Papers. Association for Computational Linguistics, p. 111-116 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  100. Published

    A hybrid approach to compiling bilingual dictionaries of medical terms from parallel corpora

    Kontonatsios, G., Mih{\u{a}}il{\u{a}}, C., Korkontzelos, I., Thompson, P. & Ananiadou, S., 2014, Statistical Language and Speech Processing, Second International Conference, SLSP 2014. Springer Nature, Vol. 8791. p. 57-69 13 p. (LNCS/LNAI).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  101. Published

    A Strategy for Annotating Clinical Records with Phenotypic Information relating to the Chronic Obstructive Pulmonary Disease

    Fu, X., Batista-Navarro, R. T., Rak, R. & Ananiadou, S., 2014, Proceedings of the Phenotype day at ISMB 2014. p. 1-8 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  102. Published

    Anatomical Entity Mention Recognition at Literature Scale

    Pyysalo, S. & Ananiadou, S., 2014, In : Bioinformatics. 30, 6, p. 868-875 8 p.

    Research output: Contribution to journalArticle

  103. Published

    Anatomical entity recognition with a hierarchical framework augmented by external resource

    Xu, Y., Hua, J., Ni, Z., Chen, Q., Fan, Y., Ananiadou, S., Chang, E. I-C. & Tsujii, J., 2014, In : P L o S One. 9, 10, e108396.

    Research output: Contribution to journalArticle

  104. Published

    Comparable Study of Event Extraction in Newswire and Biomedical Domains

    Miwa, M., Thompson, P., Korkontzelos, I. & Ananiadou, S., 2014, Proceedings of Coling 2014. p. 2270-2279 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  105. Published

    Discovering robust embeddings in (Dis)similarity space for high-dimensional linguistic features

    Mu, T., Miwa, M., Tsujii, J. & Ananiadou, S., 2014, In : Computational Intelligence. 30, 2, p. 285-315 30 p.

    Research output: Contribution to journalArticle

  106. Published

    Enriching the legacy literature with OCR corrections and text-mined semantic metadata.

    Batista-Navarro, R. T., Islam, A., Ulate, W., Hammock, J., Soto, A., Ananiadou, S. & Milios, E., 2014, Proceedings of the TDWG 2014 Annual Conference.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  107. Published

    Generalising semantic category disambiguation with large lexical resources for fun and profit

    Stenetorp, P., Pyysalo, S., Ananiadou, S. & Tsujii, J., 2014, In : Journal of Biomedical Semantics. 5

    Research output: Contribution to journalArticle

  108. Published

    Processing Biological Literature with Customizable Web Services Supporting Interoperable Formats

    Rak, R., Batista-Navarro, R. T., Carter, J., Rowley, A. & Ananiadou, S., 2014, In : Database. 2014

    Research output: Contribution to journalArticle

  109. Published

    Reducing systematic review workload through certainty-based screening

    Miwa, M., Thomas, J., O'Mara-Eves, A. & Ananiadou, S., 2014, In : Journal of Biomedical Informatics. 51, p. 242-253 11 p.

    Research output: Contribution to journalArticle

  110. Published

    Term Extraction

    Korkontzelos, I. & Ananiadou, S., 2014, In : Oxford Handbook of Computational Linguistics (2nd Ed.).

    Research output: Contribution to journalArticle

  111. 2013
  112. Published

    A hybrid approach to recognising discourse causality in the biomedical domain

    Mihǎilǎ, C. & Ananiadou, S., Dec 2013, Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM) 2013. IEEE, p. 361-366 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  113. Published

    Recognising Discourse Causality Triggers in the Biomedical Domain

    Mih{\u{a}}il{\u{a}}, C., Ananiadou, S. & Mihǎilǎ, C., Dec 2013, In : Journal of Bioinformatics and Computational Biology. 11, 6, 1343008.

    Research output: Contribution to journalArticle

  114. Published

    Chemistry-specific Features and Heuristics for Developing a CRF-based Chemical Named Entity Recogniser

    Batista-Navarro, R. T., Rak, R. & Ananiadou, S., Oct 2013, Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Vol. 2. p. 55-59 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  115. Published

    Customisable Curation Workflows in Argo

    Rak, R., Batista-Navarro, R. T., Rowley, A., Carter, J. & Ananiadou, S., Oct 2013, Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Vol. 1. p. 270-278 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  116. Published

    NaCTeM CTD Web Services

    Batista-Navarro, R. T., Rak, R. & Ananiadou, S., Oct 2013, Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Vol. 1. p. 85-89 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  117. Published

    NaCTeM’s BioC Modules and Resources for BioCreative IV

    Rak, R., Batista-Navarro, R. T., Rowley, A., Miwa, M., Carter, J. & Ananiadou, S., Oct 2013, Proceedings of the Fourth BioCreative Challenge Evaluation Workshop. Vol. 1. p. 61-67 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  118. Published

    The potential of text mining to reduce screening workload in systematic reviews: a retrospective evaluation

    Thomas, J., O'Mara-Eves, A., McNaught, J. & Ananiadou, S., Sep 2013, p. 5-5. 1 p.

    Research output: Contribution to conferencePoster

  119. Published

    Development and Analysis of NLP Pipelines in Argo

    Rak, R., Rowley, A., Carter, J. & Ananiadou, S., Aug 2013, Proceedings of the 51st Annual Meeting of the Association for Computational Linguistics: System Demonstrations. p. 115-120 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  120. Published

    Extending an interoperable platform to facilitate the creation of multilingual and multimodal NLP applications

    Mihaila, C., Kontonatsios, G., Thompson, P., Batista-Navarro, R. T., Mihaila, C., Korkontzelos, I., Ananiadou, S., Butt, M. (ed.) & Hussain, S. (ed.), Aug 2013, Proceedings of the System Demonstration Session at The 51st Annual Meeting of the Association for Computational Linguistics. Butt, M. & Hussain, S. (eds.). Association for Computational Linguistics, p. 43-48 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  121. Published

    Making UIMA Truly Interoperable with SPARQL

    Rak, R. & Ananiadou, S., Aug 2013, Proceedings of the 7th Linguistic Annotation Workshop and Interoperability with Discourse. p. 88-97 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  122. Published

    NaCTeM EventMine for BioNLP 2013 CG and PC tasks

    Miwa, M. & Ananiadou, S., Aug 2013, Proceedings of BioNLP Shared Task 2013 Workshop. Association for Computational Linguistics, p. 94-98 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  123. Published

    Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013

    Pyysalo, S., Ohta, T. & Ananiadou, S., Aug 2013, Proceedings of the BioNLP Shared Task 2013 Workshop. Association for Computational Linguistics, p. 58-66 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  124. Published

    Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013

    Ohta, T., Pyysalo, S., Rak, R., Rowley, A., Chun, H-W., Jung, S. -J., Choi, S. -P. & Ananiadou, S., Aug 2013, Proceedings of the BioNLP Shared Task 2013 Workshop. Association for Computational Linguistics, p. 67-75 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  125. Published

    Towards a Better Understanding of Discourse: Integrating Multiple Discourse Annotation Perspectives Using UIMA

    Mihaila, C., Kontonatsios, G., Batista-Navarro, R. T., Thompson, P., Korkontzelos, I. & Ananiadou, S., Aug 2013, Proceedings of the 7th Linguistic Annotation Workshop and Interoperability with Discourse. p. 79-88 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  126. Published

    Using Random Forest to recognise translation equivalents of biomedical terms across languages

    Kontonatsios, G., Korkontzelos, I., Tsujii, J. & Ananiadou, S., Aug 2013, Proceedings of the Sixth Workshop on Building and Using Comparable Corpora. Association for Computational Linguistics, p. 95-104 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  127. Published

    What causes a causal relation? Detecting causal triggers in biomedical scientific discourse

    Mih{\u{a}}il{\u{a}}, C. & Ananiadou, S., Aug 2013, 51st Annual Meeting of the Association for Computational Linguistics Proceedings of the Student Research Workshop. Nikolova, I., Vecchi, E., Dey, A. & Krause, S. (eds.). Association for Computational Linguistics, p. 38-45 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  128. Published

    A method for integrating and ranking the evidence for biochemical pathways by mining reactions from text.

    Miwa, M., Ohta, T., Rak, R., Rowley, A., Kell, D. B., Pyysalo, S. & Ananiadou, S., 1 Jul 2013, In : Bioinformatics (Oxford, England). 29, 13, p. i44-i52

    Research output: Contribution to journalArticle

  129. Published

    Wide coverage biomedical event extraction using multiple partially overlapping corpora

    Miwa, M., Pyysalo, S., Ohta, T. & Ananiadou, S., Jun 2013, In : BMC Bioinformatics. 14, 175

    Research output: Contribution to journalArticle

  130. Published

    BioCause: Annotating and analysing causality in the biomedical domain

    Mihǎilǎ, C., Ohta, T., Pyysalo, S. & Ananiadou, S., 16 Jan 2013, In : BMC Bioinformatics. 14, 2.

    Research output: Contribution to journalArticle

  131. Published

    Negated BioEvents: Analysis and Identification

    Nawaz, R., Thompson, P. & Ananiadou, S., 16 Jan 2013, In : BMC Bioinformatics. 14, 14

    Research output: Contribution to journalArticle

  132. Published

    A method for discovering and inferring appropriate eligibility criteria in clinical trial protocols without labeled data

    Restificar, A., Korkontzelos, I. & Ananiadou, S., 2013, In : BMC Medical Informatics and Decision Making. 13, Suppl 1

    Research output: Contribution to journalArticle

  133. Published

    Distributional Semantics Resources for Biomedical Text Processing

    Pyysalo, S., Ginter, F., Moen, H., Salakoski, T. & Ananiadou, S., 2013, Proceedings of LBM 2013. p. 39-44 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  134. Published

    Enhancing search: Events and their discourse context

    Ananiadou, S., Thompson, P. & Nawaz, R., 2013, p. 318-334. 16 p.

    Research output: Contribution to conferenceOther

  135. Published

    Enhancing Search: Events and their Discourse Context

    Ananiadou, S., Thompson, P. & Nawaz, R., 2013, Computational Linguistics and Intelligent Text Processing. Springer Nature, Vol. 7817. p. 318-334 17 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  136. Published

    Facilitating the analysis of discourse phenomena in an interoperable NLP platform

    Batista-Navarro, R. T., Kontonatsios, G., Mihǎilǎ, C., Thompson, P., Rak, R., Nawaz, R., Korkontzelos, I. & Ananiadou, S., 2013, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Berlin, Germany: Springer Nature, Vol. 7816. p. 559-571 12 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  137. Published

    Large-scale event extraction from literature with multi-level gene normalization

    Van Landeghem, S., Björne, J., Wei, C. H., Hakala, K., Pyysalo, S., Ananiadou, S., Kao, H. -Y., Lu, Z., Salakoski, T., Van de Peer, Y. & Ginter, F., 2013, In : PLoS ONE. 8, 4, e55814.

    Research output: Contribution to journalArticle

  138. Published

    Mining events from the literature for bioinformatics applications

    Ananiadou, S., Thompson, P. & Nawaz, R., 2013, In : ACM SIGWEB Newsletter. Autumn 2013

    Research output: Contribution to journalArticle

  139. Published

    News search using discourse analytics

    Thompson, P., Nawaz, R., Korkontzelos, I., Black, W., McNaught, J. & Ananiadou, S., 2013, Proceedings of the DigitalHeritage 2013 - Federating the 19th Int'l VSMM, 10th Eurographics GCH, and 2nd UNESCO Memory of the World Conferences, Plus Special Sessions fromCAA, Arqueologica 2.0 et al.|Proc. Digit. Herit. Int. Congr., DigitalHeritage - Fed. Int. VSMM, Eurographics GCH, UNESCO Mem. World Conf., Plus Spec. Ses. Piscataway, NJ: IEEE, Vol. 1. p. 597-604 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  140. Published

    Supporting Discourse Phenomena in an Interoperable NLP Framework

    Batista-Navarro, R. T., Kontonatsios, G., Mihaila, C., Thompson, P., Nawaz, R., Korkontzelos, I. & Ananiadou, S., 2013, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  141. Published

    Text Mining Supporting Search for Knowledge Discovery in Diabetes

    Rutter, M., Ananiadou, S., Ohta, T. & Rutter, M. K., 2013, In : Current Cardiovascular Risk Reports. 7, 1, p. 1-8 7 p.

    Research output: Contribution to journalArticle

  142. Published

    Towards Event-based Discourse Analysis of Biomedical Text

    Nawaz, R., Thompson, P. & Ananiadou, S., 2013, In : International Journal of Computational Linguistics and Applications. 4, 2, p. 101-120 20 p.

    Research output: Contribution to journalArticle

  143. 2012
  144. Published

    Event extraction across multiple levels of biological organization

    Pyysalo, S., Ohta, T., Miwa, M., Cho, H. C., Tsujii, J. & Ananiadou, S., Sep 2012, In : Bioinformatics. 28, 18, p. 575-581 6 p., bts407.

    Research output: Contribution to journalArticle

  145. Published

    A Three-Way Perspective on Scientific Discourse Annotation for Knowledge Extraction

    Liakata, M., Thompson, P., de Waard, A., Nawaz, R., Pander Maat, H. & Ananiadou, S., Jul 2012, Proceedings of the ACL Workshop on Detecting Structure in Scholarly Discourse (DSSD). p. 37-46 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  146. Published

    Boosting automatic event extraction from the literature using domain adaptation and coreference resolution

    Miwa, M., Thompson, P. & Ananiadou, S., Jul 2012, In : Bioinformatics. 28, 13, p. 1759-1765 6 p., bts237.

    Research output: Contribution to journalArticle

  147. Published

    Analysing Entity Type Variation across Biomedical Subdomains

    Mihaila, C., Batista-Navarro, R. T. & Ananiadou, S., 26 May 2012, Proceedings of the Third Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM 2012). p. 1-7 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  148. Published

    A data and analysis resource for an experiment in text mining a collection of micro-blogs on a political topic

    Black, W. J., Procter, R., Gray, S. & Ananiadou, S., May 2012, Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012). European Language Resources Association, p. 2083-2088 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  149. Published

    Collaborative Development and Evaluation of Text-processing Workflows in a UIMA-supported Web-based Workbench

    Rak, R., Rowley, A. & Ananiadou, S., May 2012, Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012). p. 2971-2976 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  150. Published

    Meta-Knowledge Annotation at the Event Level: Comparison between Abstracts and Full Papers

    Nawaz, R., Thompson, P. & Ananiadou, S., May 2012, Proceedings of the Third Workshop on Building and Evaluating Resources for Biomedical Text Mining (BioTxtM 2012). p. 24-31 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  151. Published

    brat: a Web-based Tool for NLP-Assisted Text Annotation

    Stenetorp, P., Pyysalo, S., Topi{\'{c}}, G., Ohta, T., Ananiadou, S. & Tsujii, J., Apr 2012, Proceedings of the Demonstrations at the 13th Conference of the European Chapter of the Association for Computational Linguistics. Association for Computational Linguistics, p. 102-107 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  152. Published

    What's in a Name? Entity Type Variation across Two Biomedical Subdomains

    Batista-Navarro, R. T. & Ananiadou, S., Apr 2012, Proceedings of the Student Research Workshop at the 13th Conference of the European Chapter of the Association for Computational Linguistics. p. 38-45 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  153. Published

    Argo: An integrative, interactive, text mining-based workbench supporting curation

    Rak, R., Rowley, A., Black, W. & Ananiadou, S., 2012, In : Database. 2012, bas010.

    Research output: Contribution to journalArticle

  154. Published

    ASCOT: A text mining-based web-service for efficient search and assisted creation of clinical trials

    Korkontzelos, I., Mu, T. & Ananiadou, S., 2012, In : BMC Medical Informatics and Decision Making. 12, 1, S3.

    Research output: Contribution to journalArticle

  155. Published

    ASCOT: Assisting search and creation of clinical trials

    Korkontzelos, I. & Ananiadou, S., 2012, IHI'12 - Proceedings of the 2nd ACM SIGHIT International Health Informatics Symposium|IHI - Proc. ACM SIGHIT Int. Health Informatics Symp.. Association for Computing Machinery, p. 855-858 3 p. (IHI '12).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  156. Published

    Biomedical Chinese-English CLIR Using an Extended CMeSH Resource to Expand Queries

    Wang, X., Thompson, P. & Ananiadou, S., 2012, Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012). p. 1148-1155 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  157. Published

    Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far

    Stenetorp, P., Pyysalo, S., Ohta, T., Ananiadou, S. & Tsujii, J., 2012, Proceedings of ExProM 2012. p. 47-56 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  158. Published

    Building trainable taggers in a web-based, UIMA-supported NLP workbench

    Rak, R., Kolluru, B. & Ananiadou, S., 2012, Proceedings of the 50th Annual Meeting of the Association for Computational Linguistics (ACL 2012). p. 121-126 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  159. Published

    Developing multilingual text mining workflows in UIMA and U-compare

    Kontonasios, G., Korkontzelos, I., Ananiadou, S. & Kontonatsios, G., 2012, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Berlin, Heidelberg: Springer Nature, Vol. 7337. p. 82-93 11 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  160. Published

    Extracting semantically enriched events from biomedical literature.

    Miwa, M., Thompson, P., McNaught, J., Kell, D. & Ananiadou, S., 2012, In : BMC Bioinformatics. 13, 1, 108.

    Research output: Contribution to journalArticle

  161. Published

    Identification of Manner in Bio-Events

    Nawaz, R., Thompson, P. & Ananiadou, S., 2012, Proceedings of the Eighth International Conference on Language Resources and Evaluation (LREC 2012). p. 3505-3510 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  162. Published

    New Resources and Perspectives for Biomedical Event Extraction

    Pyysalo, S., Stenetorp, P., Ohta, T., Kim, J-D. & Ananiadou, S., 2012, Proceedings of BioNLP 2012. p. 100-108 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  163. Published

    Open-domain Anatomical Entity Mention Detection

    Ohta, T., Pyysalo, S., Tsujii, J. & Ananiadou, S., 2012, Proceedings of the ACL Workshop on Detecting Stucture in Scholarly Discourse (DSSD). p. 27-36 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  164. Published

    Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011.

    Pyysalo, S., Ohta, T., Rak, R., Sullivan, D., Mao, C., Wang, C., Sobral, B., Tsujii, J. & Ananiadou, S., 2012, In : BMC Bioinformatics. 13, p. S2

    Research output: Contribution to journalArticle

  165. Published

    Proximity-based frameworks for generating embeddings from multi-output data

    Mu, T., Goulermas, J. Y., Tsujii, JI. & Ananiadou, S., 2012, In : IEEE Transactions on Pattern Analysis and Machine Intelligence. 34, 11, p. 2216-2232 16 p., 6127879.

    Research output: Contribution to journalArticle

  166. Published

    PubMed-Scale Event Extraction for Post-Translational Modifications, Epigenetics and Protein Structural Relations

    Björne, J., Van Landeghem, S., Pyysalo, S., Ohta, T., Ginter, F., Van de Peer, Y., Ananiadou, S. & Salakoski, T., 2012, Proceedings of BioNLP 2012. p. 82-90 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  167. Published

    Selected articles from the BioNLP Shared Task 2011

    Kim, J-D. (ed.), Pyysalo, S. (ed.), Nédellec, C. (ed.), Ananiadou, S. (ed.) & Tsujii, J. (ed.), 2012, host publication. Vol. 13.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  168. Published

    The English Language in the Digital Age

    Ananiadou, S., McNaught, J., Thompson, P., Rehm, G. (ed.) & Uszkoreit, H. (ed.), 2012, White Paper Series. Springer Nature

    Research output: Chapter in Book/Report/Conference proceedingChapter

  169. 2011
  170. Published

    U-Compare bio-event meta-service: Compatible BioNLP event extraction services

    Kano, Y., Björne, J., Ginter, F., Salakoski, T., Buyko, E., Hahn, U., Cohen, K. B., Verspoor, K., Roeder, C., Hunter, L. E., Kilicoglu, H., Bergler, S., Van Landeghem, S., Van Parys, T., Van de Peer, Y., Miwa, M., Ananiadou, S., Neves, M., Pascual-Montano, A., Özgür, A. & 8 others, Radev, D. R., Riedel, S., Sætre, R., Chun, H. W., Kim, J. D., Pyysalo, S., Ohta, T. & Tsujii, J., 18 Dec 2011, In : BMC Bioinformatics. 12, 1, 481.

    Research output: Contribution to journalArticle

  171. Published

    Adapting the Cluster Ranking Supervised Model to Resolve Coreferences in the Drug Literature

    Batista-Navarro, R. T. & Ananiadou, S., Dec 2011, Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011). p. 71-77 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  172. Published

    Adding text mining workflows as web services to the BioCatalogue

    Kontonasios, G., Korkontzelos, I., Kolluru, B. K. & Ananiadou, S., Dec 2011, SWAT4LS 2011 : 4th International Workshop on Semantic Web Applications and Tools for the Life Sciences. London: Association for Computing Machinery, p. 50-57 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  173. Published

    Extracting secondary bio-event arguments with extraction constraints

    Sasaki, Y., Wang, X. & Ananiadou, S., Nov 2011, In : Computational Intelligence. 27, 4, p. 702-721 19 p.

    Research output: Contribution to journalArticle

  174. Published

    The BioLexicon: A large-scale terminological resource for biomedical text mining

    Thompson, P., McNaught, J., Montemagni, S., Calzolari, N., del Gratta, R., Lee, V., Marchi, S., Monachini, M., Pezik, P., Quochi, V., Rupp, C., Sasaki, Y., Venturi, G., Rebholz-Schuhmann, D. & Ananiadou, S., 12 Oct 2011, In : BMC Bioinformatics. 12, 397.

    Research output: Contribution to journalArticle

  175. Published

    Enriching a biomedical event corpus with meta-knowledge annotation

    Thompson, P., Nawaz, R., McNaught, J. & Ananiadou, S., 10 Oct 2011, In : BMC Bioinformatics. 12, 393.

    Research output: Contribution to journalArticle

  176. Published

    Detecting experimental techniques and selecting relevant documents for protein-protein interactions from biomedical literature

    Wang, X., Rak, R., Restificar, A., Nobata, C., Rupp, C. J., Batista-Navarro, R. T. B., Nawaz, R. & Ananiadou, S., 3 Oct 2011, In : BMC Bioinformatics. 12, 8, S11.

    Research output: Contribution to journalArticle

  177. Published

    Automatic Extraction of Angiogenesis Bio-Process from Text

    Wang, X., McKendrick, I., Barrett, I., Dix, I., French, T., Tsujii, J. & Ananiadou, S., Sep 2011, In : Bioinformatics.

    Research output: Contribution to journalArticle

  178. Published

    Discovering and visualizing indirect associations between biomedical concepts

    Tsuruoka, Y., Miwa, M., Hamamoto, K., Tsujii, J. & Ananiadou, S., Jul 2011, In : Bioinformatics. 27, 13, p. 111-119 8 p., btr214.

    Research output: Contribution to journalArticle

  179. Published

    Towards Interoperability of European Language Resources

    Ananiadou, S., Thompson, P., Kano, Y., McNaught, J., Attwood, T., Day, P. J. R., Keane, J., Jackson, D. & Pettifer, S., Jul 2011, In : Ariadne. 67

    Research output: Contribution to journalArticle

  180. Published

    Building a coreference-annotated corpus from the domain of biochemistry

    Batista-Navarro, R. T., Cohen, K. (ed.), Demner-Fushman, D. (ed.), Ananiadou, S. (ed.), Pestian, J. (ed.), Tsujii, J. (ed.) & Webber, B. (ed.), Jun 2011, Proceedings of the 2011 Workshop on Biomedical Natural Language Processing, ACL-HLT 2011. Cohen, K., Demner-Fushman, D., Ananiadou, S., Pestian, J., Tsujii, J. & Webber, B. (eds.). Association for Computational Linguistics, p. 83-91 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  181. Published

    U-Compare: A modular NLP workflow construction and evaluation system

    Kano, Y., Miwa, M., Cohen, K. B., Hunter, L. E., Ananiadou, S. & Tsujii, J., May 2011, In : IBM Journal of Research and Development. 55, 3

    Research output: Contribution to journalArticle

  182. Published

    AGRA: Analysis of gene ranking algorithms

    Kocbek, S., Sætre, R., Stiglic, G., Kim, J. D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. & Tsujii, J., Apr 2011, In : Bioinformatics. 27, 8, p. 1185-1186 1 p., btr097.

    Research output: Contribution to journalArticle

  183. Published

    Applications of text mining within systematic reviews

    Thomas, J., McNaught, J. & Ananiadou, S., Mar 2011, In : Research Synthesis Methods. 2, 1, p. 1-14

    Research output: Contribution to journalArticle

  184. Published

    Discovering Potential Drugs by Extracting Biological Activities of Natural Products

    Ananiadou, S. & Batista-Navarro, R. T., Jan 2011, Workshop on Mining the Pharmacogenomics Literature, Pacific Symopsium on Biocomputing 2011.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  185. Published

    UKPMC: A full text article resource for the life sciences

    McEntyre, J. R., Ananiadou, S., Andrews, S., Black, W. J., Boulderstone, R., Buttery, P., Chaplin, D., Chevuru, S., Cobley, N., Coleman, L. A., Davey, P., Gupta, B., Haji-Gholam, L., Hawkins, C., Horne, A., Hubbard, S. J., Kim, J. H., Lewin, I., Lyte, V., MacIntyre, R. & 13 others, Mansoor, S., Mason, L., McNaught, J., Newbold, E., Nobata, C., Ong, E., Pillai, S., Rebholz-Schuhmann, D., Rosie, H., Rowbotham, R., Rupp, C. J., Stoehr, P. & Vaughan, P., Jan 2011, In : Nucleic acids research.. 39, 1, p. D58-D65

    Research output: Contribution to journalArticle

  186. Published

    Almost Total Recall: Semantic Category Disambiguation Using Large Lexical Resources and Approximate String Matching

    Stenetorp, P., Pyysalo, S., Ananiadou, S. & Tsujii, J., 2011, In : Proceedings of the Fourth International Symposium on Languages in Biology and Medicine (LBM 2011).

    Research output: Contribution to journalArticle

  187. Published

    An ontology-based disambiguation of terms

    Soldatova, L. N., Kolluru, B., King, R. D., Qi, D. & Ananiadou, S., 2011, Proceedings of the Workshop on Mining the Pharmacogenomics Literature, Pacific Symopsium on Biocomputing.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  188. Published

    Analysis of gene ranking algorithms with extraction of relevant biomedical concepts from Pubmed publications

    Kocbek, S., Saetre, R., Stiglic, G., Kim, J-D., Pernek, I., Tsuruoka, Y., Kokol, P., Ananiadou, S. & Tsujii, J., 2011, Proceedings of the 1st IEEE International Conference on Computational Advances in Bio and medical Sciences (ICCABS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  189. Published

    Anatomical Entity Recognition with Open Biomedical Ontologies

    Pyysalo, S., Ohta, T. & Ananiadou, S., 2011, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  190. Published

    Automatic extraction of microorganisms and their habitats from free text using text mining workflows.

    Kolluru, B., Nakjang, S., Hirt, R. P., Wipat, A. & Ananiadou, S., 2011, In : Journal of integrative bioinformatics. 8, 2, p. 184

    Research output: Contribution to journalArticle

  191. Published

    Automatic extraction of microorganisms and their habitats from free text using text mining workflows.

    Kolluru, B., Nakjang, S., Hirt, R. P., Wipat, A. & Ananiadou, S., 2011, Journal of integrative bioinformatics|J Integr Bioinform. Vol. 8. p. 184

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  192. Published

    Extending a Tool Resource Framework with U-Compare

    Rosner, M., Attard, A., Thompson, P., Gatt, A. & Ananiadou, S., 2011, Proceedings of the 5th Language \& Technology Conference (LTC'2011).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  193. Published

    Mining metabolites: Extracting the yeast metabolome from the literature

    Nobata, C., Dobson, P. D., Iqbal, S. A., Mendes, P., Tsujii, J., Kell, D. B. & Ananiadou, S., 2011, In : Metabolomics. 7, 1, p. 94-101 7 p.

    Research output: Contribution to journalArticle

  194. Published

    Named entity recognition for bacterial type IV secretion systems

    Ananiadou, S., Sullivan, D., Black, W., Levow, G. A., Gillespie, J. J., Mao, C., Pyysalo, S., Kolluru, B., Tsujii, J. & Sobral, B., 2011, In : PLoS ONE. 6, 3, e14780.

    Research output: Contribution to journalArticle

  195. Published

    Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011

    Pyysalo, S., Ohta, T., Rak, R., Sullivan, D., Mao, C., Wang, C., Sobral, B., Tsujii, J. & Ananiadou, S., 2011, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  196. Published

    Pathway Curation Support as an Information Extraction Task

    Ohta, T., Pyysalo, S., Ananiadou, S. & Tsujii, J., 2011, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  197. Published

    Promoting Interoperability of Resources in META-SHARE

    Thompson, P., Kano, Y., McNaught, J., Pettifer, S., Attwood, T., Keane, J. & Ananiadou, S., 2011, IJCNLP 2011 Proceedings of the Workshop on Language Resources,Technology and Services in the Sharing Paradigm. N, C., T, I., S, P. & V, S. (eds.). Asian Federation of Natural Language Processing, p. 50-58 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  198. Published

    Text mining for efficient search and assisted creation of clinical trials

    Korkontzelos, I., Mu, T., Restificar, A. & Ananiadou, S., 2011, International Conference on Information and Knowledge Management, Proceedings|Int Conf Inf Knowledge Manage. p. 43-50 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  199. Published

    Towards Interoperability of European Language Resources

    Ananiadou, S., Thompson, P., Kano, Y., McNaught, J., Attwood, T. K., Day, P. J. R., Keane, J., Jackson, D. & Pettifer, S., 2011, In : Ariadne. 67

    Research output: Contribution to journalArticle

  200. Published

    Using workflows to explore and optimise named entity recognition for chemistry

    Kolluru, B., Hawizy, L., Murray-Rust, P., Tsujii, J. & Ananiadou, S., 2011, In : PLoS ONE. 6, 5, e20181.

    Research output: Contribution to journalArticle

  201. 2010
  202. Published

    Supporting the education evidence portal via text mining

    Ananiadou, S., Thompson, P., Thomas, J., Mu, T., Oliver, S., Rickinson, M., Sasaki, Y., Weissenbacher, D. & McNaught, J., 28 Aug 2010, In : Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences. 368, 1925, p. 3829-3844 15 p.

    Research output: Contribution to journalArticle

  203. Published

    Event extraction for systems biology by text mining the literature

    Ananiadou, S., Pyysalo, S., Tsujii, J. & Kell, D. B., Jul 2010, In : Trends in Biotechnology. 28, 7, p. 381-390 9 p.

    Research output: Contribution to journalArticle

  204. Published

    PathText: A text mining integrator for biological pathway visualizations

    Kemper, B., Matsuzaki, T., Matsuoka, Y., Tsuruoka, Y., Kitano, H., Ananiadou, S. & Tsujii, J., 1 Jun 2010, In : Bioinformatics. 26, 12, p. 374-381 7 p., btq221.

    Research output: Contribution to journalArticle

  205. Published

    Evaluating a text mining based educational search portal

    Ananiadou, S., McNaught, J., Thomas, J. & Oliver, S., May 2010, Proceedings of the Seventh International Conference on Language Resources and Evaluation (LREC2010). Paris: European Language Resources Association, p. 3344-3350 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  206. Published

    Building a high-quality sense inventory for improved abbreviation disambiguation

    Okazaki, N., Ananiadou, S. & Tsujii, J., 30 Mar 2010, In : Bioinformatics. 26, 9, p. 1246-1253 7 p., btq129.

    Research output: Contribution to journalArticle

  207. Published

    The value of an in-domain lexicon in genomics QA

    Sasaki, Y., McNaught, J. & Ananiadou, S., Feb 2010, In : Journal of Bioinformatics and Computational Biology. 8, 1, p. 147-161 14 p.

    Research output: Contribution to journalArticle

  208. Published

    Disambiguating the species of biomedical named entities using natural language parsers

    Wang, X., Tsujii, J. & Ananiadou, S., 6 Jan 2010, In : Bioinformatics. 26, 5, p. 661-667 6 p., btq002.

    Research output: Contribution to journalArticle

  209. Published

    A Specialised Verb Lexicon as the Basis of Fact Extraction in the Biomedical Domain

    Rupp, C., Thompson, P., Black, W., McNaught, J. & Ananiadou, S., 2010, Proceedings of interdisciplinary workshop on verbs: the identification and representation of verb features (Verb 2010). Pisa, p. 6pp

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  210. Published

    A task oriented extension of the Chinese MeSH Concepts Hierarchy

    Ananiadou, S. & Wang, X., 2010, host publication. p. 23-30 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  211. Published

    Evaluating a meta-knowledge annotation scheme for bio-events

    Ananiadou, S., Nawaz, R. & Thompson, P., 2010, host publication. p. 69-77 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  212. Published

    Event Interpretation: A Step towards Event-Centred Text Minin

    Ananiadou, S., Nawaz, R. & Thompson, P., 2010, host publication. p. 103-107 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  213. Published

    High-Precision Semantic Search by Generating and Testing Questions.

    Black, W., Rupp, C., Nobata, C., McNaught, J., Tsujii, J. & Ananiadou, S., 2010, Proceedings of the UK e-Science All Hands Meeting. p. 3pp

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  214. Published

    Imbalanced classification using dictionary-based prototypes and hierarchical decision rules for entity sense disambiguation

    Mu, T., Wang, X., Tsujii, J. & Ananiadou, S., 2010, Coling 2010 - 23rd International Conference on Computational Linguistics, Proceedings of the Conference|Coling - Int. Conf. Comput. Linguist., Proc. Conf.. Association for Computational Linguistics, Vol. 2. p. 851-859 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  215. Published

    Improving search through Event-based Biomedical Text Mining

    Ananiadou, S., Thompson, P. & Nawaz, R., 2010.

    Research output: Contribution to conferenceOther

  216. Published

    Meta-knowledge annotation of bio-events

    Nawaz, R., Thompson, P., McNaught, J. & Ananiadou, S., 2010, Proceedings of the Seventh International Conference on Language Resources and Evaluation (LREC2010). Paris: European Language Resources Association, p. 2498-2505 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  217. Published

    NaCTeM Systems for BioCreative III PPI Tasks

    Wang, X., Rak, R., Restificar, A., Nobata, C., Rupp, CJ., Batista-Navarro, R. T., Nawaz, R. & Ananiadou, S., 2010, Proceedings of the BioCreative III Workshop. p. 142-147 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  218. Published

    Proximity-based graph embeddings for multi-label classification

    Mu, T. & Ananiadou, S., 2010, KDIR 2010 - Proceedings of the International Conference on Knowledge Discovery and Information Retrieval|KDIR - Proc. Int. Conf. Knowl. Discov. Inf. Retr.. p. 74-84 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  219. Published

    Towards Event Extraction from Full Texts on Infectious Diseases

    Ananiadou, S., Pyysalo, S., Ohta, T., Cho, H-C., Sullivan, D., Mao, C., Sobral, B. & Tsujii, J., 2010, host publication. p. 132-140 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  220. Published

    U-Compare: An integrated language resource evaluation platform including a comprehensive UIMA resource library.

    Ananiadou, S., Kano, Y., Dorado, R., McCrochon, L. & Tsujii, J., 2010, host publication. p. 428-434 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  221. 2009
  222. Published

    Supporting systematic reviews using text mining

    Ananiadou, S., Rea, B., Okazaki, N., Procter, R. & Thomas, J., Nov 2009, In : Social Science Computer Review. 27, 4, p. 509-523 14 p.

    Research output: Contribution to journalArticle

  223. Published

    Construction of an annotated corpus to support biomedical information extraction

    Thompson, P., Iqbal, S. A., McNaught, J. & Ananiadou, S., 23 Oct 2009, In : BMC Bioinformatics. 10, 349.

    Research output: Contribution to journalArticle

  224. Published

    Community Platform for Pathway Model Building

    Matsuoka, Y., Ghosh, S., Kikuchi, N., Sætre, R., Kemper, B., Okazaki, N., Ananiadou, S., Tsujii, J. & Kitano, H., Sep 2009, 10th International Conference on Systems Biology. p. 139-140 2 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  225. Published

    U-Compare: Share and compare text mining tools with UIMA

    Kano, Y., Baumgartner, W. A., McCrohon, L., Ananiadou, S., Cohen, K. B., Hunter, L. & Tsujii, J., Aug 2009, In : Bioinformatics. 25, 15, p. 1997-1998 1 p.

    Research output: Contribution to journalArticle

  226. Published

    An improved automatic term recognition method for spanish

    Barrón-Cedeño, A., Sierra, G., Drouin, P. & Ananiadou, S., 2009, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Proceedings of the 10th International Conference on Intelligent Text Processing and Computational Linguistics (CICLing 2009): Springer Nature, Vol. 5449. p. 125-136 11 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  227. Published

    ASSIST: Education Evidence Portal

    Rea, B., Weissenbacher, D., Sasaki, Y., Thomas, J. & Ananiadou, S., 2009, Proceedings of the UK e-Science All Hands Meeting 2009.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  228. Published

    Biological event recognition with textual induction

    Sasaki, Y., Thompson, P., McNaught, J. & Ananiadou, S., 2009, Proceedings of the 3rd International Symposium on Languages in Biology and Medicine (LBM-2009). p. 91-96 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  229. Published

    Bootstrapping a verb lexicon for biomedical information extraction

    Venturi, G., Montemagni, S., Marchi, S., Sasaki, Y., Thompson, P., McNaught, J. & Ananiadou, S., 2009, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Heidelberg: Springer Nature, Vol. 5449. p. 137-148 11 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  230. Published

    Classifying relations for biomedical named entity disambiguation

    Wang, X., Tsujii, J. & Ananiadou, S., 2009, EMNLP 2009 - Proceedings of the 2009 Conference on Empirical Methods in Natural Language Processing: A Meeting of SIGDAT, a Special Interest Group of ACL, Held in Conjunction with ACL-IJCNLP 2009|EMNLP - Proc. Conf. Empir. Methods Nat. Lang. Process.: Meet. SIGDAT, Spec. Interest Group ACL, Held Conjunction ACL-IJCNLP. p. 1513-1522 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  231. Published

    Clinical text classification under the open and closed topic assumptions

    Sasaki, Y., Rea, B. & Ananiadou, S., 2009, In : International Journal of Data Mining and Bioinformatics. 3, 3, p. 299-313 14 p.

    Research output: Contribution to journalArticle

  232. Published

    Fast full parsing by linear-chain conditional random fields

    Tsuruoka, Y., Tsujii, J. & Ananiadou, S., 2009, EACL 2009 - 12th Conference of the European Chapter of the Association for Computational Linguistics, Proceedings|EACL - Conf. Eur. Chapter Assoc. Comput. Linguist., Proc.. p. 790-798 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  233. Published

    Highly scalable text mining - Parallel tagging application

    Tekiner, F., Tsuruoka, Y., Tsujii, J. & Ananiadou, S., 2009, ICSCCW 2009 - 5th International Conference on Soft Computing, Computing with Words and Perceptions in System Analysis, Decision and Control|ICSCCW - Int. Conf. Soft Comput., Comput. Words Percept. Syst. Anal., Decis. Control.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  234. Published

    Improving full text search with text mining tools

    Piao, S., Rea, B., McNaught, J. & Ananiadou, S., 2009, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 5723. p. 301-302 1 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  235. Published

    Integrated NLP Evaluation System for Pluggable Evaluation Metrics with Extensive Interoperable Toolkit

    Kano, Y., McCrochon, L., Ananiadou, S. & Tsujii, J., 2009, Proceedings of the NAACL HLT Workshop on Software Engineering, Testing, and Quality Assurance for Natural Language Processing. p. 22-30 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  236. Published

    Semantic Search on Digital Document Repositories based on Text Mining Results

    Nobata, C., Sasaki, Y., Okazaki, N., Rupp, C. J., Tsujii, J. & Ananiadou, S., 2009, International Conferences on Digital Libraries and the Semantic Web 2009 (ICSD2009). p. 34-48 15 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  237. Published

    Sentiment analysis with knowledge resource and NLP tools

    Piao, S., Tsuruoka, Y. & Ananiadou, S., 2009, In : International Journal of Interdisciplinary Social Sciences. 4, 5, p. 17-28 11 p.

    Research output: Contribution to journalArticle

  238. Published

    Text mining for biomedicine

    Ananiadou, S., 2009, Information Retrieval in Biomedicine: Natural Language Processing for Knowledge Integration|Info. Retr. in Biomed.: Nat. Lang. Proc. for Knowledge Intgn.. IGI Press, p. 1-9 8 p.

    Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

  239. Published

    The Value of an In-Domain Lexicon in Genomics QA

    Ananiadou, S., Sasaki, Y. & McNaught, J., 2009, host publication. p. 47-55 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  240. Published

    Three BioNLP Tools Powered by the BioLexicon

    Sasaki, Y., Thompson, P., McNaught, J. & Ananiadou, S., 2009, Proceeedings of EACL 2009 : Demonstration Session. p. 61-64 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  241. Published

    UK Institutional Repository Search: Innovation and Discovery

    Lyte, V., Jones, S., Ananiadou, S. & Kerr, L., 2009, In : Ariadne. 61

    Research output: Contribution to journalArticle

  242. 2008
  243. Published

    Accelerating the annotation of sparse named entities by dynamic sentence selection

    Tsuruoka, Y., Tsujii, JI. & Ananiadou, S., 19 Nov 2008, BMC Bioinformatics|BMC Bioinform.. Vol. 9.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  244. Published

    How to make the most of NE dictionaries in statistical NER

    Sasaki, Y., Tsuruoka, Y., McNaught, J. & Ananiadou, S., 19 Nov 2008, In : BMC Bioinformatics. 9, supplement 11, S5.

    Research output: Contribution to journalArticle

  245. Published

    FACTA: A text search engine for finding associated biomedical concepts

    Tsuruoka, Y., Tsujii, J. & Ananiadou, S., Nov 2008, In : Bioinformatics. 24, 21, p. 2559-2560 1 p.

    Research output: Contribution to journalArticle

  246. Published

    Building a Bio-Event Annotated Corpus for the Acquisition of Semantic Frames from Biomedical Corpora

    Thompson, P., Cotter, P., McNaught, J., Ananiadou, S., Montemagni, S., Trabucco, A. & Venturi, G., May 2008, Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008). p. 2159-2166 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  247. Published

    Categorising Modality in Biomedical Texts

    Thompson, P., Venturi, G., McNaught, J., Montemagni, S. & Ananiadou, S., May 2008, Proceedings of the LREC 2008 Workshop on Building and Evaluating Resources for Biomedical Text Mining.. p. 27-34 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  248. Published

    Clustering Related Terms with Definitions

    Piao, S., McNaught, J. & Ananiadou, S., May 2008, Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008). p. 2013-2019 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  249. Published

    Connecting Text Mining and Pathways using the PathText Resource

    Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. & Tsujii, J., May 2008, Proceedings of the Sixth International Conference on Language Resources and Evaluation (LREC 2008). p. 1736-1740 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  250. Published

    Normalizing biomedical terms by minimizing ambiguity and variability

    Tsuruoka, Y., McNaught, J. & Ananiadou, S., 11 Apr 2008, In : BMC Bioinformatics. 9, 3, S2.

    Research output: Contribution to journalArticle

  251. Published

    Generating Natural Language specifications from UML class diagrams

    Meziane, F., Athanasakis, N. & Ananiadou, S., Jan 2008, In : Requirements Engineering. 13, 1, p. 1-18 17 p.

    Research output: Contribution to journalArticle

  252. Published

    Sharable type system design for tool inter-operability and combinatorial comparison

    Kano, Y., Nguyen, N., Sætre, R., Fukamachi, K., Yoshida, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. & Tsujii, J., Jan 2008, Proceedings of the First International Conference on Global Interoperability for Language Resources (ICGL). p. 122-129 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  253. Published

    Towards Data And Goal Oriented Analysis: Tool Inter-Operability And Combinatorial Comparison

    Kano, Y., Nguyen, N., Sætre, R., Yoshida, K., Fukamachi, K., Miyao, Y., Tsuruoka, Y., Ananiadou, S. & Tsujii, J., Jan 2008, Proceedings of the 3rd International Joint Conference on Natural Language Processing (IJCNLP-2008). p. 859-864 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  254. Published

    A discriminative candidate generator for string transformations

    Okazaki, N., Tsuruoka, Y., Ananiadou, S. & Tsujii, J., 2008, EMNLP 2008 - 2008 Conference on Empirical Methods in Natural Language Processing, Proceedings of the Conference: A Meeting of SIGDAT, a Special Interest Group of the ACL|EMNLP - Conf. Empir. Methods Nat. Lang. Process., Proc. Conf.: Meet. SIGDAT, Spec. Interest Group ACL. p. 447-456 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  255. Published

    BioLexicon: Towards a Reference Terminological Resource in the Biomedical Domain

    Rebholz-Schuhmann, D., Pezik, P., Lee, V., Kim, J-J., del Gratta, R., Sasaki, Y., McNaught, J., Montemagni, S., Monachini, M., Calzolari, N. & Ananiadou, S., 2008, Proceedings of the of the 16th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB-2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  256. Published

    Compositional Enrichment of Bio-Ontologies

    Splendiani, A., Piao, S., Sasaki, Y., Ananiadou, S., McNaught, J. & Burgun, A., 2008, Proceedings of 11th Annual Bio-Ontologies Meeting, at the Intelligent Systems for Molecular Biology 2008 Conference (ISMB-2008).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  257. Published

    Event frame extraction based on a gene regulation corpus

    Sasaki, Y., Thompson, P., Cotter, P., McNaught, J. & Ananiadou, S., 2008, Coling 2008 - 22nd International Conference on Computational Linguistics, Proceedings of the Conference|Coling - Int. Conf. Comput. Linguist., Proc. Conf.. Vol. 1. p. 761-768 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  258. Published

    Event frame extraction based on a gene regulation corpus

    Sasaki, Y., Thompson, P., Cotter, P., McNaught, J. & Ananiadou, S., 2008, p. 761-768.

    Research output: Contribution to conferencePaper

  259. Published

    Filling the gaps between tools and users: A tool comparator, using protein-protein interaction as an example

    Kano, Y., Nguyen, N., SÆtre, R., Yoshida, K., Miyao, Y., Tsuruoka, Y., Matsubayashi, Y., Ananiadou, S. & Tsujii, J., 2008, Pacific Symposium on Biocomputing 2008, PSB 2008|Pac. Symp. Biocomputing, PSB. p. 616-627 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  260. Published

    Identifying Sections in Scientific Abstracts using Conditional Random Fields

    Hirohata, K., Okazaki, N., Ananiadou, S. & Ishizuka, M., 2008, Proceedings of the 3rd International Joint Conference on Natural Language Processing (IJCNLP 2008). p. 381-388 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  261. Published

    PathText: Text Mining Tools Integrated with Biological Pathway

    Sætre, R., Kemper, B., Oda, K., Okazaki, N., Matsuoka, Y., Kikuchi, N., Kitano, H., Tsuruoka, Y., Ananiadou, S. & Tsujii, J., 2008, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  262. 2007
  263. Published

    Learning string similarity measures for gene/protein name dictionary look-up using logistic regression

    Tsuruoka, Y., McNaught, J., Tsujii, J. & Ananiadou, S., 15 Oct 2007, In : Bioinformatics. 23, 20, p. 2768-2774 6 p.

    Research output: Contribution to journalArticle

  264. Published

    SemText: A semantically enriched information retrieval system for biology

    Ananiadou, S., Cotter, P., Nobata, C., Okazaki, N., Rea, B., Sasaki, Y., Tsuruoka, Y. & Tsujii, J., 1 Oct 2007, Proceedings of the 8th International Conference on Systems Biology (ICSB 2007).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  265. Published

    An annotation type system for a data-driven NLP pipeline

    Hahn, U., Buyko, E., Tomanek, K., Piao, S., McNaught, J., Tsuruoka, Y. & Ananiadou, S., 2007, ACL 2007: The LAW - Proceedings of The Linguistic Annotation Workshop|ACL - LAW, Proc. Linguist. Annot. Workshop. p. 33-40 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  266. Published

    BOOTStrep Annotation Scheme: Encoding Information for Text Mining

    Piao, S., Buyko, E., Tsuruoka, Y., Tomanek, K., Kim, J-D., McNaught, J., Hahn, U., Su, J. & Ananiadou, S., 2007, Proceedings of the 4th Corpus Linguistics Conference (CL2007).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  267. Published

    C-value for Authorship Identification

    Frantzi, K. & Ananiadou, S., 2007, Proceedings of the 8th Conference on Forensic Linguistics, Language and Law.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  268. Published

    Integrating Annotation Tools into UIMA for Interoperability

    Piao, S., Ananiadou, S. & McNaught, J., 2007, Proceedings of the UK e-Science AHM Conference 2007. p. 575-582 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  269. Published

    Mining Opinion Polarity Relations of Citations

    Piao, S., Ananiadou, S., Tsuruoka, Y., Sasaki, Y. & McNaught, J., 2007, Proceedings of the 7th International Workshop on Computational Semantics. p. 366-371 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  270. Published

    Multi-topic aspects in clinical text classification

    Sasaki, Y., Rea, B. & Ananiadou, S., 2007, Proceedings - 2007 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2007|Proc. IEEE Int. Conf. Bioinformatics Biomed., BIBM. p. 62-67 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  271. Published

    Supporting Systematic Reviews using Text Mining

    Ananiadou, S., Procter, R., Rea, B., Sasaki, Y. & Thomas, J., 2007, Proceedings of the 3rd International Conference on e-Social Science. 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  272. Published

    Text Mining Services to Support E-Research

    Rea, B. & Ananiadou, S., 2007, UK e-Science All Hands Meeting.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  273. Published

    The National Centre for Text Mining: a Vision for the Future

    Ananiadou, S., 2007, In : Ariadne. 53

    Research output: Contribution to journalArticle

  274. 2006
  275. Published

    Building an abbreviation dictionary using a term recognition approach

    Okazaki, N. & Ananiadou, S., 15 Dec 2006, In : Bioinformatics. 22, 24, p. 3089-3095 6 p.

    Research output: Contribution to journalArticle

  276. Published

    Text mining and its potential applications in systems biology

    Ananiadou, S., Kell, D. B. & Tsujii, J. I., Dec 2006, In : Trends in Biotechnology. 24, 12, p. 571-579 8 p.

    Research output: Contribution to journalArticle

  277. Published

    Clustering Acronyms in Biomedical Text for Disambiguation

    Okazaki, N. & Ananiadou, S., 2006, Proceedings of Fifth International conference on Language Resources and Evaluation (LREC 2006). p. 959-962 4 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  278. Published

    Introduction to Text Mining for Biology and Biomedicine

    Ananiadou, S. & McNaught, J., 2006, Text Mining for Biology and Biomedicine. Ananiadou, S. & McNaught, J. (eds.). Norwood, MA.: Artech House, Inc, p. 1-12

    Research output: Chapter in Book/Report/Conference proceedingForeword/postscript

  279. Published

    Introduction to Text Mining in Biology

    Ananiadou, S. (ed.) & McNaught, J. (ed.), 2006, Text Mining for Biology and Biomedicine. p. 1-12

    Research output: Chapter in Book/Report/Conference proceedingChapter

  280. Published

    Mining semantically related terms from biomedical literature

    Nenadić, G. & Ananiadou, S., 2006, In : ACM Transactions on Asian Language Information Processing. 5, 1, p. 22-43 21 p.

    Research output: Contribution to journalArticle

  281. Published

    Ontology based Semantic Annotation for Knowledge Extraction

    Kim, J-D., Ananiadou, S. & Tsujii, J., 2006, 2nd International Digital Curation Conference.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  282. Published

    Proceedings of the Second International Symposium on Semantic Mining in Biomedicine (SMBM)

    Ananiadou, S. & Fluck, J., 2006, host publication.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  283. Published

    Terminology-based knowledge mining for new knowledge discovery

    Mima, H., Ananiadou, S. & Matsushima, K., 2006, In : ACM Transactions on Asian Language Information Processing. 5, 1, p. 74-88 14 p.

    Research output: Contribution to journalArticle

  284. Published

    Text Mining for Biology And Biomedicine

    Ananiadou, S. (ed.) & McNaught, J. (ed.), 2006, Boston: Artech House, Inc. 286 p. (Artech House bioinformatics)

    Research output: Book/ReportBook

  285. 2005
  286. Published

    Text mining and ontologies in biomedicine: Making sense of raw text

    Spasic, I., Ananiadou, S., McNaught, J. & Kumar, A., Sep 2005, In : Briefings in Bioinformatics. 6, 3, p. 239-251 12 p.

    Research output: Contribution to journalArticle

  287. Published

    Thesaurus or logical ontology, which one do we need for text mining?

    Tsujii, J. & Ananiadou, S., Feb 2005, In : Language Resources and Evaluation. 39, 1, p. 77-90 13 p.

    Research output: Contribution to journalArticle

  288. Published

    The National Centre for Text Mining: Aims and Objectives

    Ananiadou, S., Chruszcz, J., Keane, J., McNaught, J. & Watry, P., Jan 2005, In : Ariadne. 42

    Research output: Contribution to journalArticle

  289. Published

    A flexible measure of contextual similarity for biomedical terms

    Spasić, I. & Ananiadou, S., 2005, Proceedings of the Pacific Symposium on Biocomputing 2005, PSB 2005|Proc. Pac. Symp. Biocomputing, PSB. p. 197-208 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  290. Published

    A Machine Learning Approach To Acronym Generation

    Tsuruoka, Y., Ananiadou, S. & Tsujii, J., 2005, Proceedings of the Workshop On Linking Biological Literature Ontologies And Databases. p. 25-31

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  291. Published

    Developing a robust part-of-speech tagger for biomedical text

    Tsuruoka, Y., Tateishi, Y., Kim, J. D., Ohta, T., McNaught, J., Ananiadou, S. & Tsujii, J., 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 3746. p. 382-392 10 p. (Advances in Informatics - 10th Panhellenic Conference on Informatics).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  292. 2004
  293. Published

    Introduction: Named entity recognition in biomedicine

    Ananiadou, S., Friedman, C. & Tsujii, JI., Dec 2004, In : Journal of Biomedical Informatics. 37, 6, p. 393-395 2 p.

    Research output: Contribution to journalArticle

  294. Published

    Using automatically learnt verb selectional preferences for classification of biomedical terms

    Spasić, I. & Ananiadou, S., Dec 2004, In : Journal of Biomedical Informatics. 37, 6, p. 483-497 14 p.

    Research output: Contribution to journalArticle

  295. Published

    Automatic Discovery of Term Similarities Using Pattern Mining

    Nenadić, G., Spasić, I. & Ananiadou, S., 2004, In : International Journal of Terminology. 10, 1, p. 55-80

    Research output: Contribution to journalArticle

  296. Published

    Enhancing automatic term recognition through recognition of variation

    Nenadic, G., Ananiadou, S. & McNaught, J., 2004, Proceedings of COLING 2004. p. 604-610

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  297. Published

    Learning to classify biomedical terms through literature mining and genetic algorithms

    Spasić, I., Nenadić, G. & Ananiadou, S., 2004, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Springer Nature, Vol. 3177. p. 345-351 6 p. (Lecture Notes in Computer Science).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  298. 2003
  299. Published

    An Integrated Term-Based Corpus Query System

    Manios, K., Nenadic, G., Spasic, I. & Ananiadou, S., 2003, {EACL} 2003, 10th Conference of the European Chapter of the Association for Computational Linguistics, April 12-17, 2003, Agro Hotel, Budapest, Hungary. p. 243-250 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  300. Published

    Morpho-Syntactic Clues for Terminological Processing in Serbian

    Nenadic, G., Spasic, I. & Ananiadou, S., 2003, Proc. EACL Workshop on Morphological Processing of Slavic Languages. p. 79-86 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  301. Published

    Reducing Lexical Ambiguity in Serbo-Croatian by Using Genetic Algorithms

    Nenadic, G., Spasic, I., Ananiadou, S., Kosta, P. (ed.), Blaszczak, J. (ed.), Frasek, J. (ed.), Geist, L. (ed.) & Zygis, M. (ed.), 2003, Investigations into Formal Slavic Linguistics. Frankfurt: Peter Lang, Vol. 10. p. 287-298 12 p. (Linguistik International).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  302. Published

    Selecting Features for Text- based Classification: from Documents to Terms

    Nenadic, G., Rice, S., Spasic, I. & Ananiadou, S. S., 2003, Proc. ACL Workshop on NLP in Biomedicine. p. 121-128 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  303. Published

    Terminology-driven mining of biomedical literature

    Nenadic, G., Spasic, I. & Ananiadou, S., 2003, Proceedings of the 2003 ACM Symposium on Applied Computing (SAC), March 9-12, 2003, Melbourne, FL, USA. Association for Computing Machinery, p. 83-87 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  304. Published

    Terminology-driven Mining of Biomedical Literature

    Nenadic, G., Spasic, I. & Ananiadou, S., 2003, In : Bioinformatics. 19, 8, p. 938-943 6 p.

    Research output: Contribution to journalArticle

  305. Published

    Using Domain-Specific Verbs for Term Classification

    Spasic, I., Nenadic, G. & Ananiadou, S., 2003, Proc. ACL Workshop on NLP in Biomedicine. p. 17-24 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  306. 2002
  307. Published

    A Genetic Algorithm Approach to Unsupervised Learning of Context Features

    Spasic, I., Nenadic, G. & Ananiadou, S., 2002, Proc. 5th National Colloquium for Computational Linguistics in the UK (CLUK). p. 12-19 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  308. Published

    A Methodology for Terminology-based Knowledge Acquisition and Integration

    Mima, H., Ananiadou, S., Nenadic, G. & Tsujii, J., 2002, 19th International Conference on Computational Linguistics, COLING 2002, Howard International House and Academia Sinica, Taipei, Taiwan, August 24 - September 1, 2002. p. 667-673 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  309. Published

    An Integrated System for Ontology-based Knowledge Structuring and Discovery

    Mima, H., Ananiadou, S., Nenadic, G. & Tsujii, J., 2002, Proc. SOFG 2002 (Standards and Ontologies for Functional Genomics).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  310. Published

    Automatic Acronym Acquisition and Term Variation Management within Domain-Specific Texts

    Nenadic, G., Spasic, I. & Ananiadou, S., 2002, Proceedings of the Third International Conference on Language Resources and Evaluation, LREC 2002, May 29-31, 2002, Las Palmas, Canary Islands, Spain. p. 2155-2162 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  311. Published

    Automatic discovery of term similarities using pattern mining

    Nenadic, G., Spasic, I. & Ananiadou, S., 2002, Proc. 2nd International Workshop on Computational Terminology. p. 1-7 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  312. Published

    Reducing lexical ambiguity in Serbo-Croatian by using genetic algorithms

    Nenadic, G., Spasic, I. & Ananiadou, S., 2002, Proc. 4th Eur. Conf. on Formal Description of Slavic Languages (FDSL- 4).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  313. Published

    Supervised Learning of Term Similarities

    Spasic, I., Nenadic, G., Manios, K. & Ananiadou, S., 2002, Intelligent Data Engineering and Automated Learning - IDEAL 2002: Third International Conference, Manchester, UK, August 12-14, Proceedings. Yin, H., Allinson, N. M., Freeman, R. T., Keane, J. A. & Hubbard, S. J. (eds.). Springer Nature, Vol. 2412. p. 429-434 6 p. (Lecture Notes in Computer Science; no. 2412).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  314. Published

    Term based literature mining from biomedical texts

    Ananiadou, S., Nenadic, G., Schuhmann, D. & Spasic, I., 2002, Proc.Intelligent Systems for Molecular Biology (ISMB).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  315. Published

    Terminology-driven literature mining and knowledge acquisition in biomedicine

    Nenadic, G., Mima, H., Spasic, I., Ananiadou, S., Tsujii, J. & Spasić, I., 2002, In : I. J. Medical Informatics. 67, 1-3, p. 33-48 16 p.

    Research output: Contribution to journalArticle

  316. Published

    Tuning Context Features with Genetic Algorithms

    Spasic, I., Nenadic, G. & Ananiadou, S., 2002, Proceedings of the Third International Conference on Language Resources and Evaluation, LREC 2002, May 29-31, 2002, Las Palmas, Canary Islands, Spain. p. 2048-2054 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  317. Published

    XML tag information management system: A workbench for ontology-based knowledge acquisition and integration

    Mima, H., Ananiadou, S., Nenadic, G. & Tsujii, J., 2002, Proc. Human Language Technology Conference (HLT 2002). p. 286-292 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  318. 2001
  319. Published

    A terminology management workbench for Molecular Biology.

    Ananiadou, S., Nenadic, G. & Mima, H., 2001, Proc. 19th ESF/Twente Workshop on Language Technology: Information Extraction in Molecular Biology. p. 7-12 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  320. Published

    Term extraction using a similarity-based approach

    Maynard, D., Ananiadou, S., Bourigault, D. (ed.), Jacquemin, C. (ed.) & L???Homme, M-C. (ed.), 2001, Recent Advances in Computational Terminology. Amsterdam: John Benjamins Publishing Company, Vol. 2. p. 261-279 19 p. (Natural Language Processing Series).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  321. Published

    Term variation as an integrated part of automatic term recognition

    Ananiadou, S. . K., 2001, Proc. Recent Advances in NLP (RANLP-2001).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  322. Published

    The ATRACT Workbench: Automatic Term Recognition and Clustering for Terms

    Mima, H., Ananiadou, S. & Nenadic, G., 2001, Text, Speech and Dialogue, 4th International Conference, TSD 2001, Zelezna Ruda, Czech Republic, September 11-13, 2001, Proceedings. p. 126-133 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  323. 2000
  324. Published

    An application and evaluation of the C/NC-value approach for the automatic term recognition of multi-word units in Japanese

    Mima, H. & Ananiadou, S., 2000, In : International Journal of Terminology. 6, 2, p. 175-194 20 p.

    Research output: Contribution to journalArticle

  325. Published

    Automatic recognition of multi-word terms: the C-value/NC-value method

    Frantzi, K. T., Ananiadou, S. & Mima, H., 2000, In : International Journal on Digital Libraries . 3, 2, p. 115-130 16 p.

    Research output: Contribution to journalArticle

  326. Published

    Creating and Using Domain-specific Ontologies for Terminological Applications

    Maynard, D. & Ananiadou, S., 2000, Proceedings of the Second International Conference on Language Resources and Evaluation, LREC 2000, 31 May - June 2, 2000, Athens, Greece. p. 869-873 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  327. Published

    Evaluation of automatic term recognition of nuclear receptors from Medline

    Ananiadou, S., Albert, S. & Schuhmann, D., 2000, In : Genome Informatics. 11, p. 450-451 2 p.

    Research output: Contribution to journalArticle

  328. Published

    Identifying Terms by their Family and Friends

    Maynard, D. & Ananiadou, S., 2000, {COLING} 2000, 18th International Conference on Computational Linguistics, Proceedings of the Conference, 2 Volumes, July 31 - August 4, 2000, Universität des Saarlandes, Saarbrücken, Germany. p. 530-536 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  329. Published

    Terminological acquaintance: The importance of contextual information in terminology

    Maynard, D. & Ananiadou, S., 2000, Proc. Int. Workshop on Computational Terminology for Medical and Biological Applications. p. 19-28 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  330. Published

    TRUCKS: A model for automatic multi-word term recognition

    Maynard, D. & Ananiadou, S., 2000, In : Journal of Natural Language Processing. 8, 1, p. 101-125 25 p.

    Research output: Contribution to journalArticle

  331. 1999
  332. Published

    A linguistic approach to terminological context clustering

    Maynard, D. & Ananiadou, S., 1999, Proc. Natural Language Pacific Rim Symposium (NLPRS ???99). p. 346-351 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  333. Published

    A Web-based integrated knowledge mining aid system using term-oriented Natural Language Processing

    Mima, H., Ananiadou, S. & Tsujii, J., 1999, Proc. Natural Language Pacific Rim Symposium (NLPRS ???99). p. 13-18 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  334. Published

    Automatic classification of technical terms using the NC-value method for term recognition

    Frantzi, K., Ananiadou, S. & Tsujii, J., 1999, Proc. Int. Conf. on Computational Lexicography (COMPLEX ???99). p. 57-66 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  335. Published

    Classifying Technical Terms

    Frantzi, K. T., Ananiadou, S. & Tsujii, J., 1999, Electronic Publishing '99, Redefining the Information Chain - New Ways and Voices: 3rd ICCC/IFIP conference held at the University of Karlskrona/Ronneby - ELPUB 1999, Karlskrona, Sweden, May 10-12, 1999. Proceedings.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  336. Published

    Clustering terms using the C-value method for automatic term recognition

    Frantzi, K. & Ananiadou, S., 1999, Proc. 5th Int. Congress on Terminology and Knowledge Engineering (TKE 99). p. 356-366 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  337. Published

    Identifying contextual information for multi-word term extraction

    Maynard, D. & Ananiadou, S., 1999, Proc. 5th Int. Congress on Terminology and Knowledge Engineering (TKE 99). p. 212-221 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  338. Published

    Incorporating linguistic information for multi-word term extraction

    Maynard, D. & Ananiadou, S., 1999, Proc. 2nd Computational Linguistics, UK Research Colloquium (CLUK2).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  339. 1998
  340. Published

    A connectionist approach to term recognition

    Marshall, P., Bandar, Z. & Ananiadou, S., 1998, Proc. 12th Int. Conf. on Artificial Intelligence and Expert Systems Applications.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  341. Published

    Acquiring contextual information for term disambiguation

    Maynard, D. & Ananiadou, S., 1998, Proc. Int. Workshop on Computational Terminology (COMPUTERM ???98). p. 86-90 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  342. Published

    Machine translation trends in Europe and in Japan

    Ananiadou, S., 1998, Proc. Translating and the Computer 20.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  343. Published

    Term sense disambiguation using a domain-specific thesaurus

    Maynard, D. & Ananiadou, S., 1998, Proc. 1st Int. Conf. on Language Resources and Evaluation (LREC ???98). p. 681-687 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  344. Published

    Term sense disambiguation using a domain-specific thesaurus

    Maynard, D. & Ananiadou, S., 1998, Proc. 1st Computational Linguistics, UK Research Colloquium (CLUK1).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  345. Published

    The C-value / Example-based approach to the automatic recognition of multi-word terms for cross-language terminology

    Mima, H., Frantzi, K., S, U. & Ananiadou, S., 1998, Proc. Int. Joint Workshop on Cross-Language Issues in AI. p. 10-21 12 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  346. Published

    The C-value/NC-value Method of Automatic Recognition for Multi-Word Terms

    Frantzi, K. T., Ananiadou, S. & Tsujii, J., 1998, Research and Advanced Technology for Digital Libraries, Second European Conference, ECDL '98, Heraklion, Crete, Greece, September 21-23, 1998, Proceedings. p. 585-604 20 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  347. 1997
  348. Published

    A natural language approach to information retrieval

    Frantzi, K. & Ananiadou, S., 1997, Proc. 3rd DELOS Workshop on Cross-Language Information Retrieval.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  349. Published

    Adding structural constraints to lexically based context matching techniques

    Radford, I., Ananiadou, S. & Tsujii, J., 1997, Proc. Int. Joint Conf. on Artificial Intelligence (IJCAI-97).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  350. Published

    Context information for the extraction of terms

    Frantzi, K. & Ananiadou, S., 1997, Proc. 18th Ann. Mtng. of the Department of Linguistics. Aristotle University of Thessaloniki..

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  351. Published

    Information retrieval and natural language processing

    J, U., Tsujii, U., S, U. & Ananiadou, S., 1997, Proc. Information Retrieval with Asian Languages (IRAL-97).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  352. Published

    Term disambiguation by adding structural constraints to lexically-based context matching techniques

    S, U., Ananiadou, S. & Tsujii, J., 1997, Proc. Natural Language Processing Pacific Rim Symposium (NLPRS ???97).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  353. Published

    Term identification using contextual cues

    Frantzi, K., Ananiadou, S. & Tsujii, J., 1997, Proc. 2nd Workshop on Multilinguality in the Software Industry: the AI Contribution (MULSAIC???97).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  354. Published

    Term recognition for information retrieval and information extraction

    S, U. & Ananiadou, S., 1997, Proc. Int. Workshop on NLP and Information Retrieval..

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  355. Published

    Towards a sublanguage-based semantic clustering algorithm

    Arranz, M. V., Radford, I., Ananiadou, S. & Tsujii, J., 1997, Recent Advances in Natural Language Processing. Mitkov, R. & Nicolov, N. (eds.). Amsterdam: John Benjamins Publishing Company, p. 125-136 12 p. (Current Issues in Linguistic Theory).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  356. 1996
  357. Published

    A hybrid approach to automatic term recognition

    Frantzi, K. & Ananiadou, S., 1996, Proc. Int. Conf. on Natural Language Processing and Industrial Applications. p. 93-98 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  358. Published

    Dynamic hypertext navigation using a conceptual graph representation

    Ananiadou, S., Radford, I. & Tsujii, J., 1996, Proc. 4th Int. Conf. on Conceptual Structures.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  359. Published

    Extracting nested collocations

    Frantzi, K., Ananiadou, S. & Tsujii, J., 1996, Proc. Second Ann. Mtng. Association for Natural Language Processing. p. 202-212 11 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  360. Published

    Extracting Nested Collocations

    Frantzi, K. T. & Ananiadou, S., 1996, 16th International Conference on Computational Linguistics, Proceedings of the Conference, COLING 1996, Center for Sprogteknologi, Copenhagen, Denmark, August 5-9, 1996. p. 41-46 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  361. Published

    Extracting terminological expressions

    Frantzi, K., Ananiadou, S. & Tsujii, J., 1996, In : The Special Interest Group Notes of Information Processing Society of Japan. 96-NL-112, p. 83-88 6 p.

    Research output: Contribution to journalArticle

  362. Published

    Towards a linguistic treatment of compounds in a machine translation environment

    Ananiadou, S., 1996, In : Journal of Natural Language Processing. 3, 1, p. 45-66 22 p.

    Research output: Contribution to journalArticle

  363. 1995
  364. Published

    Automatic recognition of medical terminology (Immunology)

    Ananiadou, S., 1995, Proc. MedInfo ???95. p. 3-8 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  365. Published

    Dynamic Context Matching for Knowledge Acquisition from Small Corpora

    Radford, I., Arranz, V. M., Ananiadou, S., Tsujii, J., Bolasco, S. (ed.), Lebart, L. (ed.) & Salem, A. (ed.), 1995, Analisi Statistica dei Dati Testuali, Vol. 1. Rome: CISU, p. 321-328 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  366. Published

    Statistical approaches for collocation extraction and term recognition.

    Frantzi, K. & Ananiadou, S., 1995, Proc. 16th Ann. Mtng. of the Department of Linguistics. p. 681-693 13 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  367. Published

    Statistical measures for terminological extraction

    Frantzi, K., Ananiadou, S., Bolasco, S. (ed.), Lebart, L. (ed.) & Salem, A. (ed.), 1995, Analisi Statistica dei Dati Testuali, Vol. 1. Rome: CISU, p. 292-304 13 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  368. Published

    Sublanguage knowledge acquisition for hypertext optimisation

    Ananiadou, S. R. & Tsujii, J., 1995, Proc. Natural Language Processing Pacific Rim Symposium. p. 455-460 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  369. Published

    Terms are not alone: Aids for term choice and choice terms

    Ananiadou, S. & McNaught, J., 1995, In : Aslib Proceedings. 47, 2, p. 47-60 14 p.

    Research output: Contribution to journalArticle

  370. Published

    Tools for sublanguage-based semantic knowledge acquisition from corpora

    Arranz, M. V., Radford, I., Ananiadou, S., J, U. & Tsujii, U., 1995, In : Procesamiento del Lenguaje Natural. 17, p. 182-194 13 p.

    Research output: Contribution to journalArticle

  371. Published

    Towards automatic term recognition

    Frantzi, K. & Ananiadou, S., 1995, Proc. 7th Int. Conf. on Artificial Intelligence and Expert Systems Applications (EXPERSYS-95).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  372. 1994
  373. Published

    A computational linguistic approach to automatic term recognition

    Ananiadou, S., Albrechtsen, H. (ed.) & Oernager, S. (ed.), 1994, Knowledge Organization and Quality Management, Vol. 4. Frankfurt: Indeks Verlag, p. 134-141 8 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  374. Published

    A Methodology For Automatic Term Recognition

    Ananiadou, S., 1994, 15th International Conference on Computational Linguistics, COLING 1994, Kyoto, Japan, August 5-9, 1994. p. 1034-1038 5 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  375. Published

    Knowledge-based processing in machine translation

    Tsujii, J., Ananiadou, S., Fuchi, K. (ed.) & Yokoi, T. (ed.), 1994, Knowledge Building and Knowledge Sharing. Toky0: IOS Press, p. 68-81 14 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  376. Published

    Systematic knowledge elicitation from natural language texts

    Ananiadou, S., 1994, Proc. 6th Int. Conf. on Expert Systems Applications & Artificial Intelligence (EXPERSYS-94). p. 467-472 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  377. 1993
  378. Published

    A sublanguage approach to automatic term recognition

    Ananiadou, S., 1993, Proc. Natural Language Processing Pacific Rim Symposium. p. 159-164 6 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  379. Published

    Epsilon [e]: Tool kit for knowledge acquisition based on a hierarchy of pseudotexts

    Tsujii, J. & Ananiadou, S., 1993, Proc. Natural Language Processing Pacific Rim Symposium. p. 93-100 8 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  380. Published

    Knowledge-based processing in machine translation

    Tsujii, J. & Ananiadou, S., 1993, Proc. Int. Conf. on Building and Sharing of Very Large-Scale Knowledge Bases.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  381. Published

    LBMT, KBMT, SBMT and EBMT: An attempt at integration

    Tsujii, J. & Ananiadou, S., 1993, Proc. Int. Workshop on Speech Translation.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  382. 1992
  383. Published

    A visualisation architecture based on the systematicity of language

    P, U., Olivier, U., Ananiadou, S. & Tsujii, J., 1992, Proc. Pacific Rim International Conference on AI (PRICAI).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  384. Published

    Automatic Learning for Semantic Collocation

    Sekine, S., Carroll, J. J., Ananiadou, S. & Tsujii, J., 1992, Proc. Third Conf. on Applied Natural Language Processing. p. 104-110 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  385. Published

    Linguistic Knowledge Generator

    Sekine, S., Ananiadou, S., Carroll, J. J. & Tsujii, J., 1992, 14th International Conference on Computational Linguistics, COLING 1992, Nantes, France, August 23-28, 1992. p. 560-566 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  386. Published

    Visualisation: mediating the interchange of information from the verbal to the visual domain

    Olivier, P., Ananiadou, S., Maeda, T. & Tsujii, J., 1992, Mensch und Maschine - Informationelle Schnittstellen der Kommunikation: Proceedings des 3. Internationalen Symposiums für Informationswissenschaft, ISI 1992, Saarbrücken, Germany, November 5-7, 1992.. p. 324-337 14 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  387. 1991
  388. Published

    Multilingual linguistic aspects of machine translation

    Ananiadou, S. & Antona, M., 1991, Proc. 12th Ann. Mtng. of the Department of Linguistics: Studies in Greek Linguistics. p. 291-305 15 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  389. Published

    The treatment of derivational morphology in a multilingual transfer-based machine translation system: EUROTRA

    Ananiadou, S., Ralli, A. & Villalva, A., 1991, In : Language Research. 27, 4, p. 627-638 12 p.

    Research output: Contribution to journalArticle

  390. Published

    Towards interaction during transfer

    Tsujii, J., Ananiadou, S., Carroll, J. J. & Phillips, J. D., 1991, Proc. RCOLING III. p. 141-157 17 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  391. 1990
  392. Published

    Sublanguage studies as the basis for computer support for multilingual communication

    Ananiadou, S., 1990, Proc. Terminology and Planning (Termplan-90).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  393. Published

    The treatment of derivational morphology in a multilingual transfer-based machine translation system: EUROTRA

    Ananiadou, S., 1990, Proc. Seoul Int. Conf. on Natural Language Processing (SICONLP/90). p. 351-359 9 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  394. Published

    The use of sublanguages in machine translation

    Ananiadou, S., 1990, Proc. UK Speech and Language Technology Club Workshop on Machine Translation.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  395. Published

    Treatment of compounds in a transfer-based MT system

    Ananiadou, S. & Mcnaught, J., 1990, Proc. 3rd Int. Conf. on Theoretical and Methodological Issues in Machine Translation. p. 57-63 7 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  396. 1989
  397. Published

    Machine translation: Unfulfilled promise?

    Ananiadou, S., 1989, In : Medium. 9, 3, p. 24-44 21 p.

    Research output: Contribution to journalArticle

  398. 1988
  399. Published

    The Impact of Knowledge Engineering on the Training of Terminologists

    Ananiadou, S., Czap, H. (ed.) & Galinski, C. (ed.), 1988, TKE-87: Terminology and Knowledge Engineering, Supplement. Frankfurt: Indeks Verlag, p. 118-120 3 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  400. 1987
  401. Published

    A brief survey of some current operational systems

    Ananiadou, S. & King, M. (ed.), 1987, Machine Translation Today. Edinburgh: Edinburgh University Press, p. 171-191 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  402. 1986
  403. Published

    Present and future contributions of the Eurotra project to languages for special purposes

    Ananiadou, S., Fornu, A. (ed.) & Vanparijs, J. (ed.), 1986, Beads or Bracelet: How do we approach LSP?. Oxford: Oxford University Press, p. 357-365

    Research output: Chapter in Book/Report/Conference proceedingChapter

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