Dr Paul Martin

Bioinformatics Research Fellow

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Publications

  1. 2020
  2. Published
  3. Accepted/In press

    Combined genetic analysis of juvenile idiopathic arthritis clinical subtypes identifies novel risk loci, target genes and key regulatory mechanisms

    Lopez Isac, E., Smith, S., Marion, M. C., Wood, A., Sudman, M., Yarwood, A., Shi, C., Gaddi, V., Martin, P., Prahalad, S., Eyre, S., Orozco, G., Morris, A., Langefeld, C. D., Thompson, S. D., Thomson, W. & Bowes, J., 16 Sep 2020, (Accepted/In press) In : Annals of the rheumatic diseases.

    Research output: Contribution to journalArticlepeer-review

  4. Published

    Analysis of chromatin organization and gene expression in T cells identifies functional genes for rheumatoid arthritis

    Yang, J., Mcgovern, A., Martin, P., Duffus, K., Ge, X., Zarrineh, P., Morris, A., Adamson, A., Fraser, P., Rattray, M. & Eyre, S., 2 Sep 2020, In : Nature Communications. 11, 4402.

    Research output: Contribution to journalArticlepeer-review

  5. Published

    Mapping DNA interaction landscapes in psoriasis susceptibility loci highlights KLF4 as a target gene in 9q31

    Ray-Jones, H., Duffus, K., Mcgovern, A., Martin, P., Shi, C., Hankinson, J., Gough, O., Yarwood, A., Morris, A., Adamson, A., Taylor, C., Ding, J., Gaddi, V., Fu, Y., Gaffney, P., Orozco, G., Warren, R. & Eyre, S., 4 May 2020, In : BMC Biology. 18, 1, 47.

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Diversity of peripheral blood human NK cells identified by single cell RNA sequencing

    Smith, S., Kennedy, P., Stacey, K., Worboys, J., Yarwood, A., Seo, S., Solloa, E. H., Mistretta, B., Chatterjee, S., Gunaratne, P., Allette, K., Wang, Y-C., Smith, M., Sebra, R., Mace, E. M., Horowitz, A., Thomson, W., Martin, P., Eyre, S. & Davis, D. M., 14 Apr 2020, In : Blood Advances. 4, 7, p. 1388-1406 19 p.

    Research output: Contribution to journalArticlepeer-review

  7. 2019
  8. Published

    Comparative performances of machine learning methods for classifying Crohn Disease patients using genome-wide genotyping data

    International Inflammatory Bowel Disease Genetics Consortium (IIBDGC), 1 Dec 2019, In : Scientific Reports. 9, 1, 10351.

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Chromatin interactions reveal novel gene targets for drug repositioning in rheumatic diseases

    Martin, P., Ding, J., Duffus, K., Gaddi, V., Mcgovern, A., Ray-Jones, H., Yarwood, A., Worthington, J., Barton, A. & Orozco, G., 15 May 2019, In : Annals Of Rheumatic Diseases.

    Research output: Contribution to journalArticlepeer-review

  10. 2017
  11. Published

    Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform

    Castelino, M., Eyre, S., Moat, J., Fox, G., Martin, P., Ho, P., Upton, M. & Barton, A., 21 Jan 2017, In : BMC Microbiology. 17, 1, 23.

    Research output: Contribution to journalArticlepeer-review

  12. 2016
  13. Published

    Identifying Causal Genes at the Multiple Sclerosis Associated Region 6q23 Using Capture Hi-C

    Martin, P., Mcgovern, A., Massey, J., Schoenfelder, S., Duffus, K., Yarwood, A., Barton, A., Worthington, J., Fraser, P., Eyre, S. & Orozco, G., 18 Nov 2016, In : PLoS ONE. 11, 11, e0166923.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Capture Hi-C identifies a novel causal gene, IL20RA, in the pan-autoimmune genetic susceptibility region 6q23

    Mcgovern, A., Schoenfelder, S., Martin, P., Massey, J., Duffus, K., Plant, D., Yarwood, A., Pratt, A., Anderson, A., Isaacs, J. D., Diboll, J., Thalayasingam, N., Ospelt, C., Barton, A., Worthington, J., Fraser, P., Eyre, S. & Orozco, G., 1 Nov 2016, In : Genome biology. 17, 1, 212.

    Research output: Contribution to journalArticlepeer-review

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