Dr Matthew Ronshaugen

Abundant expression of somatic transposon-derived piRNAs throughout Tribolium castaneum embryogenesis

Ninova, M., Griffiths-Jones, S. & Ronshaugen, M. 26 Sep 2017 In : Genome Biology. 18, 184

Research output: Contribution to journal › Article

The house spider genome reveals an ancient whole-genome duplication during arachnid evolution

Schwager, E. E. , Sharma, P. , Clarke, T. , Leite, D. J. , Wierschin, T. , Pechmann, M. , Akiyama-Oda, Y. , Esposito, L. , Bechsgaard, J. , Bilde, T. , Buffry, A. D. , Chao, H. , Dinh, H. H. , Doddapaneni, H. V. , Dugan-Rocha, S. , Eibner, C. , Extavour, C. G. , Funch, P. , Garb, J. , Gonzalez, L. B. & 35 others Gonzalez, V. L., Griffiths-Jones, S., Han, Y., Hayashi, C., Hilbrant, M., Hughes, D. S. T., Janssen, R., Lee, S. L., Maeso, I., Murali, S. C., Muzny, D. M., Nunes da Fonseca, R., Paese, C. L. B., Qu, J., Ronshaugen, M., Schomburg, C., Schönauer, A., Stollewerk, A., Torres-Oliva, M., Turetzek, N., Vanthournout, B., Werren, J. H., Wolff, C., Worley, K. C., Bucher, G., Gibbs, R. A., Coddington, J., Oda, H., Stanke, M., Ayoub, N. A., Prpic, N. M., Flot, J. F., Posnien, N., Richards, S. & McGregor, A. P. 31 Jul 2017 In : BMC Biology. 15, 1, 62

Research output: Contribution to journal › Article

Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum

Leite, D. J., Ninova, M., Hilbrant, M., Arif, S., Griffiths-Jones, S., Ronshaugen, M. & McGregor, A. P. 3 Aug 2016 In : Genome biology and evolution. 8, 7, p. 2133-44 12 p.

Research output: Contribution to journal › Article

MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum.

Ninova, M., Ronshaugen, M. & Griffiths-Jones, S. 26 Jan 2016 In : Genome Research. 26, p. 85-96 12 p.

Research output: Contribution to journal › Article

The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima.

Chipman, A. D. , Ferrier, D. E. K. , Brena, C. , Qu, J. , Hughes, D. S. T. , Schröder, R. , Torres-Oliva, M. , Znassi, N. , Jiang, H. , Almeida, F. C. , Alonso, C. R. , Apostolou, Z. , Aqrawi, P. , Arthur, W. , Barna, J. C. J. , Blankenburg, K. P. , Brites, D. , Capella-Gutiérrez, S. , Coyle, M. , Dearden, P. K. & 86 others Du Pasquier, L., Duncan, E. J., Ebert, D., Eibner, C., Erikson, G., Evans, P. D., Extavour, C. G., Francisco, L., Gabaldón, T., Gillis, W. J., Goodwin-Horn, E. A., Green, J. E., Griffiths-Jones, S., Grimmelikhuijzen, C. J. P., Gubbala, S., Guigó, R., Han, Y., Hauser, F., Havlak, P., Hayden, L., Helbing, S., Holder, M., Hui, J. H. L., Hunn, J. P., Hunnekuhl, V. S., Jackson, L., Javaid, M., Jhangiani, S. N., Jiggins, F. M., Jones, T. E., Kaiser, T. S., Kalra, D., Kenny, N. J., Korchina, V., Kovar, C. L., Kraus, F. B., Lapraz, F., Lee, S. L., Lv, J., Mandapat, C., Manning, G., Mariotti, M., Mata, R., Mathew, T., Neumann, T., Newsham, I., Ngo, D. N., Ninova, M., Okwuonu, G., Ongeri, F., Palmer, W. J., Patil, S., Patraquim, P., Pham, C., Pu, L-L., Putman, N. H., Rabouille, C., Ramos, O. M., Rhodes, A. C., Robertson, H. E., Robertson, H. M., Ronshaugen, M., Rozas, J., Saada, N., Sánchez-Gracia, A., Scherer, S. E., Schurko, A. M., Siggens, K. W., Simmons, D., Stief, A., Stolle, E., Telford, M. J., Tessmar-Raible, K., Thornton, R., van der Zee, M., von Haeseler, A., Williams, J. M., Willis, J. H., Wu, Y., Zou, X., Lawson, D., Muzny, D. M., Worley, K. C., Gibbs, R. A., Akam, M. & Richards, S. Nov 2014 In : PLoS biology. 12, 11

Research output: Contribution to journal › Article

Conserved temporal patterns of microRNA expression in Drosophila support a developmental hourglass model

Ninova, M., Ronshaugen, M. & Griffiths-Jones, S. Sep 2014 In : Genome biology and evolution. 6, 9, p. 2459-2467 9 p.

Research output: Contribution to journal › Article

Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis.

Ninova, M., Ronshaugen, M. & Griffiths-Jones, S. Mar 2014 In : RNA (New York, N.Y.). 20, 3, p. 360-372 12 p.

Research output: Contribution to journal › Article

Target Repression Induced by Endogenous microRNAs: Large Differences, Small Effects.

Kozomara, A., Hunt, S., Ninova, M., Griffiths-Jones, S. & Ronshaugen, M. 2014 In : PLoS ONE. 9, 8, e104286

Research output: Contribution to journal › Article

Clusters of microRNAs emerge by new hairpins in existing transcripts

Marco, A., Ninova, M., Ronshaugen, M. & Griffiths-Jones, S. Sep 2013 In : Nucleic acids research.. 41, 16, p. 7745-7752 7 p.

Research output: Contribution to journal › Article