Dr Mark Humphries

Honorary Senior Research Fellow

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Publications

  1. 2019
  2. Published

    Prediction of Choice from Competing Mechanosensory and Choice-Memory Cues During Active Tactile Decision Making

    Campagner, D., Evans, M. H., Chlebikova, K., Colins-Rodriguez, A., Loft, M. S. E., Fox, S., Pettifer, D., Humphries, M. D., Svoboda, K. & Petersen, R. S., 2019, In: Journal of Neuroscience. p. 400358 1 p.

    Research output: Contribution to journalArticlepeer-review

  3. 2018
  4. Published

    A Probabilistic, Distributed, Recursive Mechanism for Decision-making in the Brain

    Caballero, J., Humphries, M. & Gurney, K., 1 Mar 2018, In: PL o S Computational Biology.

    Research output: Contribution to journalArticlepeer-review

  5. Published

    An ensemble code in medial prefrontal cortex links prior events to outcomes during learning

    Maggi, S., Peyrache, A. & Humphries, M. D., 2018, In: Nature Communications. 9, 1

    Research output: Contribution to journalArticlepeer-review

  6. Published

    Insights into Parkinson’s disease from computational models of the basal ganglia

    Humphries, M., Obeso, J. & Kisbye Dreyer, J., 2018, In: Journal of Neurology, Neurosurgery and Psychiatry .

    Research output: Contribution to journalArticlepeer-review

  7. 2017
  8. Published

    A spiral attractor network drives rhythmic locomotion

    Bruno, A. M., Frost, W. N. & Humphries, M., 7 Aug 2017, In: eLife.

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Dynamical networks: finding, measuring, and tracking neural population activity using network science

    Humphries, M., 2017, In: Network Neuroscience.

    Research output: Contribution to journalArticlepeer-review

  10. 2016
  11. Published

    The Goldilocks zone in neural circuits

    Humphries, M. D., 2 Dec 2016, In: eLife. 5, 22735.

    Research output: Contribution to journalArticle

  12. 2015
  13. Published

    Proteomic analysis of integrin-associated complexes from mesenchymal stem cells.

    Ajeian, JN., Horton, ER., Astudillo, P., Byron, A., Askari, JA., Millon-Frémillon, A., Knight, D., Kimber, SJ., Humphries, MJ. & Humphries, JD., 1 Jul 2015, In: Advanced Healthcare Materials.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Modular Deconstruction Reveals the Dynamical and Physical Building Blocks of a Locomotion Motor Program.

    Bruno, A. M., Frost, W. N. & Humphries, M. D., 25 Mar 2015, In: Neuron. 86, p. 304-318 14 p.

    Research output: Contribution to journalArticlepeer-review

  15. Published

    A new framework for cortico-striatal plasticity: behavioural theory meets in vitro data at the reinforcement-action interface

    Gurney, K., Humphries, M. D. & Redgrave, P., 6 Jan 2015, In: P L o S Biology (Online). 13, p. e1002034

    Research output: Contribution to journalArticlepeer-review

  16. Published

    Finding communities in sparse networks

    Singh, A. & Humphries, M. D., 2015, In: Scientific Reports. 5, 8828.

    Research output: Contribution to journalArticlepeer-review

  17. 2014
  18. Published

    Early hypersynchrony in juvenile PINK1-/-motor cortex is rescued by antidromic stimulation

    Carron, R., Filipchuk, A., Nardou, R., Singh, A., Michel, F. J., Humphries, M. D. & Hammond, C., 21 May 2014, In: Frontiers in Systems Neuroscience. 8, MAY, 95.

    Research output: Contribution to journalArticlepeer-review

  19. Published

    Slaves to the rhythm: Coupling of the subthalamic nucleus-globus pallidus network in Parkinsonian oscillations

    Humphries, M. D., 1 Apr 2014, In: Journal of Physiology. 592, 7, p. 1427-1428 1 p.

    Research output: Contribution to journalArticlepeer-review

  20. Published

    Transient and steady-state selection in the striatal microcircuit

    Tomkins, A., Vasilaki, E., Beste, C., Gurney, K. & Humphries, M. D., 20 Jan 2014, In: Frontiers in Computational Neuroscience. 192.

    Research output: Contribution to journalArticlepeer-review

  21. Published

    Basal Ganglia: Mechanisms for Action Selection

    Humphries, M. D., Jaeger, D. (ed.) & Jung, R. (ed.), 2014, Encyclopedia of Computational Neuroscience. New York: Springer Nature, p. 1-7

    Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

  22. Published

    Dendrites enhance both single neuron and network computation

    Humphries, M. D., Caze, R. D., Gutkin, B. S., Cuntz, H. (ed.), Remme, M. W. H. (ed.) & Torben-Nielsen, B. (ed.), 2014, The Computing Dendrite: From Structure to Function. New York: Springer Nature, p. 365-380

    Research output: Chapter in Book/Report/Conference proceedingChapter

  23. Published

    Striatal disorders dissociate mechanisms of enhanced and impaired response selection - Evidence from cognitive neurophysiology and computational modelling.

    Beste, C., Humphries, M. & Saft, C., 2014, In: NeuroImage. Clinical. 4

    Research output: Contribution to journalArticlepeer-review

  24. 2013
  25. Published

    Population-wide distributions of neural activity during perceptual decision-making

    Wohrer, A., Humphries, M. D. & Machens, C. K., Apr 2013, In: Progress in Neurobiology. 103, p. 156-193 37 p.

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Passive Dendrites Enable Single Neurons to Compute Linearly Non-separable Functions

    Cazé, R. D., Humphries, M. & Gutkin, B., Feb 2013, In: PL o S Computational Biology. 9, 2, e1002867.

    Research output: Contribution to journalArticlepeer-review

  27. Published

    Spiking and saturating dendrites differentially expand single neuron computation capacity.

    Caze, R., Humphries, M., Gutkin, B., Bartlett, P. (ed.), Pereira, FCN. (ed.), Burges, CJC. (ed.), Bottou, L. (ed.) & Weinberger, K. Q. (ed.), 2013, Advances in Neural Information Processing Systems 25. p. 1079-1087 9 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

  28. 2012
  29. Published

    Integrating cortico-limbic-basal ganglia architectures for learning model-based and model-free navigation strategies

    Khamassi, M. & Humphries, M. D., 29 Oct 2012, In: Frontiers in behavioral neuroscience. 2012

    Research output: Contribution to journalArticlepeer-review

  30. Published

    Network effects of subthalamic deep brain stimulation drive a unique mixture of responses in basal ganglia output

    Humphries, M. D. & Gurney, K., Jul 2012, In: European Journal of Neuroscience. 36, 2, p. 2240-2251 11 p.

    Research output: Contribution to journalArticlepeer-review

  31. Published

    Dopaminergic control of the exploration-exploitation trade-off via the basal ganglia

    Humphries, M. D., Khamassi, M. & Gurney, K., 2012, In: Frontiers in Neuroscience. Article 9.

    Research output: Contribution to journalArticlepeer-review

  32. 2011
  33. Published

    Onset of pup locomotion coincides with loss of NR2C/D-mediated cortico-striatal EPSCs and dampening of striatal network immature activity

    Dehorter, N., Michel, F. J., Marissal, T., Rotrou, Y., Matrot, B., Lopez, C., Humphries, M. D. & Hammond, C., 21 Nov 2011, In: Frontiers in cellular neuroscience. NOVEMBER, p. 1-14 13 p.

    Research output: Contribution to journalArticlepeer-review

  34. Published

    Spike-train communities: Finding groups of similar spike trains

    Humphries, M. D., 9 Feb 2011, In: Journal of Neuroscience. 31, 6, p. 2321-2336 15 p.

    Research output: Contribution to journalArticlepeer-review

  35. Published

    The medial reticular formation: a brainstem substrate for simple action selection?

    Humphries, M. D., Gurney, K., Prescott, T. J., Seth, A. K. (ed.) & Bryson, J. J. (ed.), 2011, Modelling Natural Action Selection. Cambridge, UK: Cambridge University Press, p. 300-329

    Research output: Chapter in Book/Report/Conference proceedingChapter

  36. 2010
  37. Published

    Reconstructing the three-dimensional gabaergic microcircuit of the striatum

    Humphries, M. D., Wood, R. & Gurney, K., Nov 2010, In: PL o S Computational Biology. 6, 11, e1001011.

    Research output: Contribution to journalArticlepeer-review

  38. Published

    The ventral basal ganglia, a selection mechanism at the crossroads of space, strategy, and reward

    Humphries, M. D. & Prescott, T. J., Apr 2010, In: Progress in Neurobiology. 90, 4, p. 385-417 32 p.

    Research output: Contribution to journalArticlepeer-review

  39. 2009
  40. Published

    Capturing dopaminergic modulation and bimodal membrane behaviour of striatal medium spiny neurons in accurate, reduced models

    Humphries, M. D., Lepora, N., Wood, R. & Gurney, K., 26 Nov 2009, In: Frontiers in Computational Neuroscience. 3, 26.

    Research output: Contribution to journalArticlepeer-review

  41. Published

    Dopamine-modulated dynamic cell assemblies generated by the GABAergic striatal microcircuit

    Humphries, M. D., Wood, R. & Gurney, K., Oct 2009, In: Neural Networks. 22, 8, p. 1174-1188 14 p.

    Research output: Contribution to journalArticlepeer-review

  42. Published

    Technical integration of hippocampus, basal ganglia and physical models for spatial navigation

    Fox, C., Humphries, M., Mitchinson, B., Kiss, T., Somogyvari, Z. & Prescott, T., 9 Mar 2009, In: Frontiers in neuroinformatics. 3, 6.

    Research output: Contribution to journalArticlepeer-review

  43. Published

    The dual-route hypothesis: Evaluating a neurocomputational model of fear conditioning in rats

    Lowe, R., Humphries, M. & Ziemke, T., Mar 2009, In: Connection Science. 21, 1, p. 15-37 22 p.

    Research output: Contribution to journalArticlepeer-review

  44. 2008
  45. Published

    Network 'small-world-ness': A quantitative method for determining canonical network equivalence

    Humphries, M. D. & Gurney, K., 30 Apr 2008, In: PLoS ONE. 3, 4, e2051.

    Research output: Contribution to journalArticlepeer-review

  46. 2007
  47. Published

    Solution methods for a new class of simple model neurons

    Humphries, M. D. & Gurney, K., Dec 2007, In: Neural Computation. 19, 12, p. 3216-3225 9 p.

    Research output: Contribution to journalArticlepeer-review

  48. Published

    Is there a brainstem substrate for action selection?

    Humphries, M. D., Gurney, K. & Prescott, T. J., 29 Sep 2007, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 362, 1485, p. 1627-1639 12 p.

    Research output: Contribution to journalArticlepeer-review

  49. Published

    A means to an end: Validating models by fitting experimental data

    Humphries, M. D. & Gurney, K., Jun 2007, In: Neurocomputing. 70, 10-12, p. 1892-1896 4 p.

    Research output: Contribution to journalArticlepeer-review

  50. 2006
  51. Published

    A physiologically plausible model of action selection and oscillatory activity in the basal ganglia

    Humphries, M. D., Stewart, R. D. & Gurney, K. N., 13 Dec 2006, In: Journal of Neuroscience. 26, 50, p. 12921-12942 21 p.

    Research output: Contribution to journalArticlepeer-review

  52. Published

    The brainstem reticular formation is a small-world, not scale-free, network.

    Humphries, M. D., Gurney, K. & Prescott, T. J., 22 Feb 2006, In: Proceedings. Biological sciences / The Royal Society. 273, 1585

    Research output: Contribution to journalArticlepeer-review

  53. Published

    A robot model of the basal ganglia: Behavior and intrinsic processing

    Prescott, T. J., Montes González, F. M., Gurney, K., Humphries, M. D. & Redgrave, P., Jan 2006, In: Neural Networks. 19, 1, p. 31-61 30 p.

    Research output: Contribution to journalArticlepeer-review

  54. 2005
  55. Published

    Is there an integrative center in the vertebrate brain-stem? A robotic evaluation of a model of the reticular formation viewed as an action selection device

    Humphries, M. D., Gurney, K. & Prescott, T. J., 2005, In: Adaptive Behavior. 13, 2, p. 97-113 16 p.

    Research output: Contribution to journalArticlepeer-review

  56. 2004
  57. Published

    Testing computational hypotheses of brain systems function: A case study with the basal ganglia

    Gurney, K. N., Humphries, M., Wood, R., Prescott, T. J. & Redgrave, P., Nov 2004, In: Network: Computation in Neural Systems. 15, 4, p. 263-290 27 p.

    Research output: Contribution to journalArticlepeer-review

  58. 2002
  59. Published

    The role of intra-thalamic and thalamocortical circuits in action selection.

    Humphries, M. D. & Gurney, K. N., Feb 2002, In: Network (London, 1990): computation in neural systems. 13, 1

    Research output: Contribution to journalArticlepeer-review

  60. 2001
  61. Published

    A pulsed neural network model of bursting in the basal ganglia

    Humphries, M. D. & Gurney, K. N., 2001, In: Neural Networks. 14, 6-7, p. 845-863 18 p.

    Research output: Contribution to journalArticlepeer-review

Research Explorer downloads

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Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

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Research output: Contribution to journalArticlepeer-review

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Research output: Contribution to journalArticlepeer-review

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Research output: Contribution to journalArticle