Prof Magnus Rattray

Professor Computational &Systems Biology

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Publications

  1. 2017
  2. Accepted/In press

    Bayesian estimation of Dierential Transcript Usage from RNA-seq data

    Papastamoulis, P. & Rattray, M. 2 Oct 2017 In : Statistical Applications in Genetics and Molecular Biology.

    Research output: Contribution to journalArticle

  3. Published

    Predicting stimulation-dependent 1 enhancer-promoter interactions from 2 ChIP-Seq time course data

    Dzida, T., Iqbal, M., Charapitsa, I., Stunnenberg, H., Matarese, F., Honkela, A. & Rattray, M. 28 Sep 2017 In : PeerJ. 5

    Research output: Contribution to journalArticle

  4. Accepted/In press

    Efficient Inference for Sparse Latent Variable Models of Transcriptional Regulation

    Dai, Z., Iqbal, M., Lawrence, N. D. & Rattray, M. 7 Aug 2017 In : Bioinformatics.

    Research output: Contribution to journalArticle

  5. Published

    BayesBinMix: an R Package for Model Based Clustering of Multivariate Binary Data

    Papastamoulis, P. & Rattray, M. 10 May 2017 In : The R Journal.

    Research output: Contribution to journalArticle

  6. Published

    A Bayesian model selection approach for identifying differentially expressed transcripts from RNA-Seq data

    Papastamoulis, P. & Rattray, M. 2017 In : Journal of the Royal Statistical Society. Series C: Applied Statistics.

    Research output: Contribution to journalArticle

  7. Published

    A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response.

    Ptushkina, M., Poolman, T., Iqbal, M., Ashe, M., Petersen, J., Woodburn, J., Rattray, M., Whetton, A. & Ray, D. 2017 In : Scientific Reports.

    Research output: Contribution to journalArticle

  8. Published

    Bayesian estimation of Dierential Transcript Usage from RNA-seq data

    Papastamoulis, P. & Rattray, M. 2017 In : Statistical Applications in Genetics and Molecular Biology.

    Research output: Contribution to journalArticle

  9. Published

    Identifying stochastic oscillations in single-cell live imaging time series using Gaussian processes

    Phillips, N., Manning, C., Papalopulu, A. & Rattray, M. 2017 In : PL o S Computational Biology.

    Research output: Contribution to journalArticle

  10. Published

    Trajectory inference and parameter estimation in stochastic models with temporally aggregated data

    Folia, M. M. & Rattray, M. 2017 In : Statistics and Computing.

    Research output: Contribution to journalArticle

  11. 2016
  12. Published

    Erratum to: Making sense of big data in health research: towards an EU action plan

    Auffray, C. , Balling, R. , Barroso, I. , Bencze, L. , Benson, M. , Bergeron, J. , Bernal-Delgado, E. , Blomberg, N. , Bock, C. , Conesa, A. , Del Signore, S. , Delogne, C. , Devilee, P. , Di Meglio, A. , Eijkemans, M. , Flicek, P. , Graf, N. , Grimm, V. , Guchelaar, H-J. , Guo, Y-K. & 37 others Gut, I. G., Hanbury, A., Hanif, S., Hilgers, R-D., Honrado, Á., Hose, D. R., Houwing-Duistermaat, J., Hubbard, T., Janacek, S. H., Karanikas, H., Kievits, T., Kohler, M., Kremer, A., Lanfear, J., Lengauer, T., Maes, E., Meert, T., Müller, W., Nickel, D., Oledzki, P., Pedersen, B., Petkovic, M., Pliakos, K., Rattray, M., I Màs, J. R., Schneider, R., Sengstag, T., Serra-Picamal, X., Spek, W., Vaas, L. A. I., van Batenburg, O., Vandelaer, M., Varnai, P., Villoslada, P., Vizcaíno, J. A., Wubbe, J. P. M. & Zanetti, G. 7 Nov 2016 In : Genome Medicine. 8, 1, p. 118

    Research output: Contribution to journalArticle

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