Prof Magnus Rattray

Professor Computational &Systems Biology

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Publications

  1. 2018
  2. Published

    Cytokine responses to rhinovirus and development of asthma, allergic sensitization and respiratory infections during childhood

    Custovic, A., Belgrave, D., Lin, L., Bakhsoliani, E., Telcian, A. G., Solari, R., Murray, C., Walton, R. P., Curtin, J., Edwards, M. R., Simpson, A., Rattray, M. & Johnston, S. L. 15 May 2018 In : American Journal of Respiratory and Critical Care Medicine. 197, 10

    Research output: Contribution to journalArticle

  3. Accepted/In press

    BGP: identifying gene-specific branching dynamics from single cell data with a branching Gaussian process

    Boukouvalas, A., Hensman, J. & Rattray, M. 1 May 2018 (Accepted/In press) In : Genome Biology.

    Research output: Contribution to journalArticle

  4. Published

    Evolution of IgE responses to multiple allergen components throughout childhood

    Howard, R., Belgrave, D., Papastamoulis, P., Simpson, A., Rattray, M. & Custovic, A. 2018 In : Journal of Allergy and Clinical Immunology.

    Research output: Contribution to journalArticle

  5. 2017
  6. Published

    Efficient Inference for Sparse Latent Variable Models of Transcriptional Regulation

    Dai, Z., Iqbal, M., Lawrence, N. D. & Rattray, M. 1 Dec 2017 In : Bioinformatics. 33, 23, p. 3776–3783

    Research output: Contribution to journalArticle

  7. Published

    Predicting stimulation-dependent 1 enhancer-promoter interactions from 2 ChIP-Seq time course data

    Dzida, T., Iqbal, M., Charapitsa, I., Stunnenberg, H., Matarese, F., Honkela, A. & Rattray, M. 28 Sep 2017 In : PeerJ. 5

    Research output: Contribution to journalArticle

  8. Published

    BayesBinMix: an R Package for Model Based Clustering of Multivariate Binary Data

    Papastamoulis, P. & Rattray, M. 10 May 2017 In : The R Journal.

    Research output: Contribution to journalArticle

  9. Published

    A Bayesian model selection approach for identifying differentially expressed transcripts from RNA-Seq data

    Papastamoulis, P. & Rattray, M. 2017 In : Journal of the Royal Statistical Society. Series C: Applied Statistics.

    Research output: Contribution to journalArticle

  10. Published

    A non-transcriptional role for the glucocorticoid receptor in mediating the cell stress response.

    Ptushkina, M., Poolman, T., Iqbal, M., Ashe, M., Petersen, J., Woodburn, J., Rattray, M., Whetton, A. & Ray, D. 2017 In : Scientific Reports.

    Research output: Contribution to journalArticle

  11. Published

    Bayesian estimation of Dierential Transcript Usage from RNA-seq data

    Papastamoulis, P. & Rattray, M. 2017 In : Statistical Applications in Genetics and Molecular Biology.

    Research output: Contribution to journalArticle

  12. Published

    Identifying stochastic oscillations in single-cell live imaging time series using Gaussian processes

    Phillips, N., Manning, C., Papalopulu, A. & Rattray, M. 2017 In : PL o S Computational Biology.

    Research output: Contribution to journalArticle

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