Dr Jean-Marc SchwartzDiplIng, PhD

Senior Lecturer

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Publications

  1. Published

    Streamlining the construction of large-scale dynamic models using generic kinetic equations

    Adiamah, D. A., Handl, J. & Schwartz, J. M., 30 Mar 2010, In : Bioinformatics. 26, 10, p. 1324-1331 7 p., btq136.

    Research output: Contribution to journalArticle

  2. Published

    Generic dynamic modeling of metabolic systems

    Adiamah, D., Handl, J. & Schwartz, JM., 2010, Proceedings Dynamic Days South America 2010: International Conference on Chaos and Nonlinear Dynamics.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  3. Published

    Construction of a genome-scale kinetic model of Mycobacterium tuberculosis using generic rate equations

    Adiamah, DA. & Schwartz, JM., Jul 2012, In : Metabolites. 2, p. 382-397

    Research output: Contribution to journalArticle

  4. Published

    Integrating geometric and biomechanical models of a liver tumour for cryosurgery simulation

    Albu, A. B., Schwartz, J. M., Laurendeau, D. & Moisan, C., 2003, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)|Lect. Notes Comput. Sci.. Vol. 2673. p. 121-131 10 p.

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  5. Published

    Insight into glucocorticoid receptor signalling through interactome model analysis: Boolean modelling of the glucocorticoid receptor

    Bakker, E. Y., Tian, K., Mutti, L., Demonacos, C., Schwartz, J-M. & Krstic-Demonacos, M., 6 Nov 2017, In : PL o S Computational Biology. e1005825.

    Research output: Contribution to journalArticle

  6. Published

    Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis

    Buiga, P., Elson, A., Tabernero, L. & Schwartz, J-M., 2018, In : BMC Systems Biology. 12, Suppl 1, 11.

    Research output: Contribution to journalArticle

  7. Published

    A meta-analysis portal for human breast cancer transcriptomics data: BreastCancerVis

    Buiga, P., Soul, J. & Schwartz, J-M., 2019, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). p. 260-264

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  8. Published

    Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines

    Buiga, P., Elson, A., Tabernero, L. & Schwartz, J. M., 1 Jun 2019, In : Computational Biology and Chemistry. 80, p. 138-146 9 p.

    Research output: Contribution to journalArticle

  9. Published

    Kinetic modeling of DUSP regulation in Herceptin-resistant HER2-positive breast cancer

    Buiga, P., Elson, A., Tabernero, L. & Schwartz, J-M., 26 Jul 2019, In : Genes. 10, 568.

    Research output: Contribution to journalArticle

  10. Published

    Flux balance analysis reveals acetate metabolism modulates cyclic electron flow and alternative glycolytic pathways in Chlamydomonas reinhardtii

    Chapman, S. P., Paget, C. M., Johnson, G. N. & Schwartz, J-M., 2015, In : Frontiers in Plant Science. 6, p. 474

    Research output: Contribution to journalArticle

  11. Published

    Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtii

    Chapman, S., Trindade dos Santos, M., Johnson, G., Kritz, M. & Schwartz, J-M., Dec 2017, In : BioSystems. 162, p. 119-127

    Research output: Contribution to journalArticle

  12. Published

    Erg and AP-1 as determinants of glucocorticoid response in acute lymphoblastic leukemia

    Chen, D. W. C., Saha, V., Liu, J. Z., Schwartz, J. M. & Krstic-Demonacos, M., 20 Jun 2013, In : Oncogene. 32, 25, p. 3039-3048 9 p.

    Research output: Contribution to journalArticle

  13. Published

    Modeling the mechanism of GR/c-Jun/Erg crosstalk in apoptosis of acute lymphoblastic leukemia

    Chen, D. W. C., Krstic-Demonacos, M. & Schwartz, J. M., 2012, In : Frontiers in Physiology. 3, Article 410.

    Research output: Contribution to journalArticle

  14. Published

    Gene expression changes in damaged osteoarthritic cartilage identify a signature of non-chondrogenic and mechanical responses

    Dunn, S., Soul, J., Anand, S., Schwartz, J-M., Boot-Handford, R. & Hardingham, T., Aug 2016, In : Osteoarthritis and Cartilage. 24, 8, p. 1431-1440 10 p.

    Research output: Contribution to journalArticle

  15. Published

    The contractile vacuole network of Dictyostelium as a distinct organelle: its dynamics visualized by a GFP marker protein

    Gabriel, D., Hacker, U., Köhler, J., Müller-Taubenberger, A., Schwartz, JM., Westphal, M. & Gerisch, G., Nov 1999, In : Journal of Cell Science. 112, 22

    Research output: Contribution to journalArticle

  16. Published

    The chaperone activity of 4PBA ameliorates the skeletal phenotype of Chihuahua, a zebrafish model for dominant osteogenesis imperfecta

    Gioia, R., Tonelli, F., Ceppi, I., Biggiogera, M., Leikin, S., Fisher, S., Tenedini, E., Yorgan, T. A., Schinke, T., Tian, K., Schwartz, J. M., Forte, F., Wagener, R., Villani, S., Rossi, A. & Forlino, A., 1 Aug 2017, In : Human Molecular Genetics. 26, 15, p. 2897-2911 15 p.

    Research output: Contribution to journalArticle

  17. Published

    Metabolic acclimation - a key to enhancing photosynthesis in changing environments?

    Herrmann, H. A., Schwartz, J-M. & Johnson, G. N., Jun 2019, In : Journal of Experimental Botany. 70, p. 3043-3056

    Research output: Contribution to journalArticle

  18. Published

    Flux sampling is a powerful tool to study metabolism under changing environmental conditions

    Herrmann, H., Dyson, B. C., Vass, L., Johnson, G. & Schwartz, J-M., 2 Sep 2019, In : npj Systems Biology and Applications. 5, 32.

    Research output: Contribution to journalArticle

  19. Published

    A MAPK-driven feedback loop suppresses Rac activity to promote RhoA-driven cancer cell invasion

    Hetmanski, J., Zindy, E., Schwartz, J-M. & Caswell, P., 3 May 2016, In : PL o S Computational Biology. 12, 5, e1004909.

    Research output: Contribution to journalArticle

  20. Published

    Rationalizing Rac1 and RhoA GTPase signaling: A mathematical approach

    Hetmanski, J., Schwartz, J-M. & Caswell, P. T., May 2018, In : Small GTPases. 9, 3, p. 224-229

    Research output: Contribution to journalReview article

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Research output: Chapter in Book/Report/Conference proceedingConference contribution