Dr Jean-Marc SchwartzDiplIng, PhD

Senior Lecturer

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Publications

  1. 2019
  2. Published

    Modelling the role of dual specificity phosphatases in herceptin resistant breast cancer cell lines

    Buiga, P., Elson, A., Tabernero, L. & Schwartz, J. M., 1 Jun 2019, In : Computational Biology and Chemistry. 80, p. 138-146 9 p.

    Research output: Contribution to journalArticle

  3. Published

    Network controllability analysis of intracellular signalling reveals viruses are actively controlling molecular systems

    Ravindran, V., Nacher, J. C., Akutsu, T., Ishitsuka, M., Osadcenco, A., Sunitha, V., Bagler, G., Schwartz, J. M. & Robertson, D. L., 14 Feb 2019, In : Scientific Reports. 9, 2066.

    Research output: Contribution to journalArticle

  4. Published

    The chloroplast genome of the marine microalga Tisochrysis lutea

    Méndez-leyva, A. B., Guo, J., Mudd, E. A., Wong, J., Schwartz, J. & Day, A., 13 Jan 2019, In : Mitochondrial DNA Part B. Resources . 4, 1, p. 253-255

    Research output: Contribution to journalArticle

  5. Published

    A meta-analysis portal for human breast cancer transcriptomics data: BreastCancerVis

    Buiga, P., Soul, J. & Schwartz, J-M., 2019, 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). p. 260-264

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

  6. Published

    Metabolic Models

    Schwartz, J-M. & Soons, Z., 2019, Encyclopedia of Bioinformatics and Computational Biology. Vol. 2. p. 438-444 6 p.

    Research output: Chapter in Book/Report/Conference proceedingEntry for encyclopedia/dictionary

  7. 2018
  8. Published

    Effect of IAPP on the Proteome of Cultured Rin-5F Cells

    Miraee-Nedjad, S., Sims, P. F. G., Schwartz, J-M. & Doig, A., 12 Nov 2018, In : BMC Biochemistry. 19, 9

    Research output: Contribution to journalArticle

  9. Published

    Modeling Rho GTPase dynamics using Boolean logic

    Hetmanski, J., Schwartz, J-M. & Caswell, P., 31 Jul 2018, Rho GTPases: Methods and Protocols. Rivero, F. (ed.). Second ed. Springer Nature , Vol. 1821. p. 37-46 (Methods in Molecular Biology ; vol. 1821).

    Research output: Chapter in Book/Report/Conference proceedingChapter

  10. Published

    Rationalizing Rac1 and RhoA GTPase signaling: A mathematical approach

    Hetmanski, J., Schwartz, J-M. & Caswell, P. T., May 2018, In : Small GTPases. 9, 3, p. 224-229

    Research output: Contribution to journalReview article

  11. Published

    Stratification of knee osteoarthritis: two major patient subgroups identified by genome wide expression analysis of articular cartilage.

    Soul, J., Dunn, S., Anand, S., Serracino-Inglott, F., Schwartz, J-M., Boot-Handford, R. & Hardingham, T., Mar 2018, In : Annals of the rheumatic diseases. 77, p. 423-430

    Research output: Contribution to journalArticle

  12. Published

    Calcium activated nucleotidase 1 (CANT1) is critical for glycosaminoglycan biosynthesis in cartilage and endochondral ossification

    Paganini, C., Monti, L., Costantini, R., Besio, R., Lecci, S., Biggiogera, M., Tian, K., Schwartz, J-M., Huber, C., Cormier-Daire, V., Gibson, B. G., Pirog, K. A., Forlino, A. & Rossi, A., 2018, In : Matrix biology : journal of the International Society for Matrix Biology.

    Research output: Contribution to journalArticle

  13. Published

    Mapping biological process relationships and disease perturbations within a pathway network

    Stoney, R., Robertson, D. L., Nenadic, G. & Schwartz, J-M., 2018, In : npj Systems Biology and Applications. 4, p. 22 22.

    Research output: Contribution to journalArticle

  14. Published

    p53 modeling as a route to mesothelioma patients stratification and novel therapeutic identification

    Tian, K., Bakker, E., Hussain, M., Guazzelli, A., Alhebshi, H., Meysami, P., Demonacos, C., Schwartz, J-M., Mutti, L. & Krstic-Demonacos, M., 2018, In : Journal of Translational Medicine. 16, 1, p. 1-15 15 p., JTRM-D-18-00488.

    Research output: Contribution to journalArticle

  15. Published

    Regulation of dual specificity phosphatases in breast cancer during initial treatment with Herceptin: a Boolean model analysis

    Buiga, P., Elson, A., Tabernero, L. & Schwartz, J-M., 2018, In : BMC Systems Biology. 12, Suppl 1, 11.

    Research output: Contribution to journalArticle

  16. Published
  17. Published

    Using set theory to reduce redundancy in pathway sets

    Stoney, R. A., Schwartz, J., Robertson, D. L. & Nenadic, G., 2018, In : BMC Bioinformatics. 19, 1

    Research output: Contribution to journalArticle

  18. 2017
  19. Published

    Cyclic decomposition explains a photosynthetic down regulation for Chlamydomonas reinhardtii

    Chapman, S., Trindade dos Santos, M., Johnson, G., Kritz, M. & Schwartz, J-M., Dec 2017, In : BioSystems. 162, p. 119-127

    Research output: Contribution to journalArticle

  20. Published

    Insight into glucocorticoid receptor signalling through interactome model analysis: Boolean modelling of the glucocorticoid receptor

    Bakker, E. Y., Tian, K., Mutti, L., Demonacos, C., Schwartz, J-M. & Krstic-Demonacos, M., 6 Nov 2017, In : PL o S Computational Biology. e1005825.

    Research output: Contribution to journalArticle

  21. Published

    The chaperone activity of 4PBA ameliorates the skeletal phenotype of Chihuahua, a zebrafish model for dominant osteogenesis imperfecta

    Gioia, R., Tonelli, F., Ceppi, I., Biggiogera, M., Leikin, S., Fisher, S., Tenedini, E., Yorgan, T. A., Schinke, T., Tian, K., Schwartz, J. M., Forte, F., Wagener, R., Villani, S., Rossi, A. & Forlino, A., 1 Aug 2017, In : Human Molecular Genetics. 26, 15, p. 2897-2911 15 p.

    Research output: Contribution to journalArticle

  22. Published

    Differential regulation of cell death pathways by the microenvironment correlates with chemoresistance and survival in leukaemia: The role of microenvironment in ALL chemoresistance

    Qattan, M. Y., Bakker, E. Y., Rajendran, R., Chen, D. W-C., Saha, V., Liu, J., Zeef, L., Schwartz, J-M., Mutti, L., Demonacos, C. & Krstic-Demonacos, M., 5 Jun 2017, In : PLoS ONE. 12, 6, p. e0178606 19 p., PONE-D-17-09893R1.

    Research output: Contribution to journalArticle

  23. Published

    A quantitative brain map of experimental cerebral malaria pathology

    Strangward, P., Haley, M. J., Shaw, T. N., Schwartz, J-M., Greig, R., Mironov, A., de Souza, J. B., Cruickshank, S. M., Craig, A. G., Milner, D. A., Allan, S. M. & Couper, K. N., 8 Mar 2017, In : PL o S Pathogens. 13, 3, p. e1006267

    Research output: Contribution to journalArticle

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Research output: Chapter in Book/Report/Conference proceedingConference contribution