Publications

Results for: biotechnology

  1. Published

    Cross-linking of aromatic phenolate groups by cytochrome P450 enzymes: A model for the biosynthesis of vancomycin by OxyB

    Ali, H. S., Henchman, R. & De Visser, S., 29 May 2020, In: Org Biomol Chem.

    Research output: Contribution to journalArticlepeer-review

  2. E-pub ahead of print

    Lignin biodegradation by a cytochrome P450 enzyme: A computational study into syringol activation by GcoA

    Ali, H. S., Henchman, R. & De Visser, S., 2 Jul 2020, (E-pub ahead of print) In: Chemistry – A European Journal.

    Research output: Contribution to journalArticlepeer-review

  3. Published

    Electrostatic perturbations in the substrate‐binding pocket of taurine/α‐ketoglutarate dioxygenase determine its selectivity

    Ali, H. S. & De Visser, S., 30 Dec 2021, In: Chemistry – A European Journal.

    Research output: Contribution to journalArticlepeer-review

  4. E-pub ahead of print

    Comparison of Free-Energy Methods to Calculate the Barriers for the Nucleophilic Substitution of Alkyl Halides by Hydroxide

    Ali, H. S., Higham, J., De Visser, S. P. & Henchman, R. H., 10 Jul 2020, (E-pub ahead of print) In: The Journal of Physical Chemistry B.

    Research output: Contribution to journalArticlepeer-review

  5. Accepted/In press

    How do electrostatic perturbations of the protein affect the bifurcation pathways of substrate hydroxylation versus desaturation in the nonheme iron-dependent viomycin biosynthesis enzyme?

    Ali, H. S., Henchman, R., Warwicker, J. & De Visser, S., 11 Feb 2021, (Accepted/In press) In: Journal of Physical Chemistry A.

    Research output: Contribution to journalArticlepeer-review

  6. Published

    CFD and kinetic‐based modeling to optimize the sparger design of a large‐scale photobioreactor for scaling up of biofuel production

    Ali, H., Solsvik, J., Wagner, J. L., Zhang, D., Hellgardt, K. & Park, C. W., 2019, In: Biotechnology and Bioengineering.

    Research output: Contribution to journalArticlepeer-review

  7. Accepted/In press

    Density functional theory study into the reaction mechanism of isonitrile biosynthesis by the nonheme iron enzyme ScoE

    Ali, H. S., Ghafoor, S. & De Visser, S., 25 May 2021, (Accepted/In press) In: Topics in Catalysis.

    Research output: Contribution to journalArticlepeer-review

  8. Published

    Isolation and molecular characterization of polyvinyl chloride (PVC) plastic degrading fungal isolates

    Ali, M. I., Ahmed, S., Robson, G., Javed, I., Ali, N., Atiq, N. & Hameed, A., Jan 2014, In: Journal of Basic Microbiology. 54, 1, p. 18-27 9 p.

    Research output: Contribution to journalArticlepeer-review

  9. Published

    Recruitment of UBPY and ESCRT exchange drive HD-PTP-dependent sorting of EGFR to the MVB.

    Ali, N., Zhang, L., Taylor, S., Mironov, A., Urbé, S. & Woodman, P., 18 Mar 2013, In: Current biology . 23, 6, p. 453-461 8 p.

    Research output: Contribution to journalArticlepeer-review

  10. Accepted/In press

    Energy-Entropy Method Using Multiscale Cell Correlation to Calculate Binding Free Energies in the SAMPL8 Host-Guest Challenge

    Ali, H. S., Chakravorty, A., Kalayan, J., De Visser, S. & Henchman, R., 22 Jun 2021, (Accepted/In press) In: Journal of computer-aided molecular design.

    Research output: Contribution to journalArticlepeer-review

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