Critical points for an accurate human genome analysis

Research output: Contribution to journalArticle

  • External authors:
  • Stefan J White
  • Jeroen F J Laros
  • Egbert Bakker
  • Anne Cambon-Thomsen
  • Samantha Leonard
  • Hanns Lochmüller
  • Gert Matthijs
  • Christopher Mattocks
  • Simon Patton
  • Hans Scheffer
  • Erica Souche
  • Ellen Thomassen
  • Rachel Thompson
  • Jan Traeger-Synodinos
  • Steven van Vooren
  • Bart Janssen
  • Johan T den Dunnen

Abstract

Next-generation sequencing is radically changing how DNA diagnostic laboratories operate. What started as a single-gene profession is now developing into gene panel sequencing and whole exome and genome sequencing (WES/WGS) analyses. With further advances in sequencing technology and concomitant price reductions, whole genome sequencing (WGS) will soon become the standard and be routinely offered. Here we focus on the critical steps involved in performing WGS, with a particular emphasis on points where WGS differs from WES, the important variables that should be taken into account, and the quality control measures that can be taken to monitor the process. The points discussed here, combined with recent publications on guidelines for reporting variants, will facilitate the routine implementation of WGS into a diagnostic setting. This article is protected by copyright. All rights reserved.

Bibliographical metadata

Original languageEnglish
JournalHuman Mutation
Early online date4 May 2017
DOIs
Publication statusPublished - 2017