Division of Infection, Immunity & Respiratory Medicine

Publications

  1. Published

    Individualised antibiotic dosing for patients who are critically ill: challenges and potential solutions

    Pharmacokinetics and Pharmacodynamics Study Group of the European Society of Clinical Microbiology and Infectious Diseases, Roberts, J. A., Abdul-Aziz, M. H., Lipman, J., Mouton, J. W., Vinks, A. A., Felton, T. W., Hope, W. W., Farkas, A., Neely, M. N., Schentag, J. J., Drusano, G., Frey, O. R., Theuretzbacher, U. & Kuti, J. L., Jun 2014, In : The Lancet Infectious Diseases. 14, 6, p. 498-509 12 p.

    Research output: Contribution to journalArticle

  2. Published

    Chronic pulmonary aspergillosis: rationale and clinical guidelines for diagnosis and management

    European Society for Clinical Microbiology and Infectious Diseases, Denning, D. W., Cadranel, J., Beigelman-Aubry, C., Ader, F., Chakrabarti, A., Blot, S., Ullmann, A. J., Dimopoulos, G. & Lange, C., 31 Dec 2015, In : The European respiratory journal. 47, 1, p. 45-68 24 p.

    Research output: Contribution to journalArticle

  3. Published

    BTS/ICS guideline for the ventilatory management of acute hypercapnic respiratory failure in adults

    Intensive Care Society Acute Hypercapnic Respiratory Failure Guideline Development Group, Davidson, A. C., Banham, S., Elliott, M., Kennedy, D., Gelder, C., Glossop, A., Church, A. C., Creagh-Brown, B., Dodd, J. W., Felton, T., Foëx, B., Mansfield, L., McDonnell, L., Parker, R., Patterson, C. M., Sovani, M., Thomas, L. & British Thoracic Society Standards of Care Committee, Apr 2016, In : Thorax. 71, Suppl 2, p. ii1-35

    Research output: Contribution to journalArticle

  4. Published

    Guidance on allergenicity assessment of genetically modified plants

    European Food Safety Authority GMO Panel, EFSA Self-task group, Naegeli, H., Birch, A. N., Casacuberta, J., De Schrijver, A., Gralak, M. A., Guerche, P., Javier Moreno, F. & Selb, R., 2017, 48 p. John Wiley & Sons Ltd.

    Research output: Other contribution

  5. Published

    Genetic association and risk scores in a chronic obstructive pulmonary disease meta-analysis of 16,707 subjects

    COPDGene Investigators, International COPD Genetics Network, National Emphysema Treatment Trial Genetics, Evaluation of COPD Longitudinally to Identify Predictive Surrogate End-Points, Busch, R., Hobbs, B. D., Zhou, J., Castaldi, P. J., McGeachie, M. J., Hardin, M. E., Hawrylkiewicz, I., Sliwinski, P., Yim, J. J., Kim, W. J., Kim, D. K., Agusti, A., Make, B. J., Crapo, J. D., Calverley, P. M., Donner, C. F. & 15 othersLomas, D. A., Wouters, E. F., Vestbo, J., Tal-Singer, R., Bakke, P., Gulsvik, A., Litonjua, A. A., Sparrow, D., Pare, P. D., Levy, R. D., Rennard, S. I., Beaty, T. H., Hokanson, J. E., Silverman, E. K. & Cho, M. H., 1 Jul 2017, In : American Journal of Respiratory Cell and Molecular Biology. 57, 1, p. 35-46 12 p.

    Research output: Contribution to journalArticle

  6. Published

    Microbiological etiologies of pneumonia complicating stroke: A systematic review

    Pneumonia In Stroke ConsEnsuS (PISCES) Group, Kishore, A., Vail, A., Jeans, A. R., Chamorro, A., Di Napoli, M., Kalra, L., Langhorne, P., Roffe, C., Westendorp, W., Nederkoorn, P. J., Garau, J., Beek, D. V. D., Montaner, J., Woodhead, M., Meisel, A. & Smith, C., Jul 2018, In : Stroke. 49, 7

    Research output: Contribution to journalArticle

  7. Published

    A computational framework for complex disease stratification from multiple large-scale datasets

    U-BIOPRED Study Group, eTRIKS Consortium, Fowler, S. J., Murray, C. S., Vestbo, J. & Woodcock, A., 29 May 2018, In : BMC Systems Biology. 12, 1, 60.

    Research output: Contribution to journalArticle

  8. Published

    Sputum proteomics and airway cell transcripts of current and ex-smokers with severe asthma in U-BIOPRED: An exploratory analysis

    U-BIOPRED Study Group & Fowler, S. J., 1 May 2018, In : European Respiratory Journal. 51, 5, 1702173.

    Research output: Contribution to journalArticle

  9. Published

    Reclassification of Bronchodilator Reversibility in the U-BIOPRED Adult Asthma Cohort Using z Scores

    U-BIOPRED Study Group, 30 Apr 2018, In : Chest. 153, 4, p. 1070-1072 3 p.

    Research output: Contribution to journalLetter

  10. Published

    Guidelines for the management of tracheal intubation in critically ill adults

    Difficult Airway Society, Feb 2018, In : British Journal of Anaesthesia. 120, 2, p. 323-352 30 p.

    Research output: Contribution to journalArticle

  11. Published

    Enhanced oxidative stress in smoking and ex-smoking severe asthma in the U-BIOPRED cohort

    U-BIOPRED Study Group, 21 Sep 2018, In : PLoS ONE. 13, 9, p. e0203874

    Research output: Contribution to journalArticle

  12. Published

    Methodological considerations for large-scale breath analysis studies: lessons from the U-BIOPRED severe asthma project

    the U-BIOPRED study group, 30 Oct 2018, In : Journal of Breath Research. 13, 1

    Research output: Contribution to journalArticle

  13. Published

    Treatable Traits in the European U-BIOPRED Adult Asthma Cohorts

    U-BIOPRED Study Group, 2018, In : Allergy.

    Research output: Contribution to journalArticle

  14. Published

    Global distribution and epidemiologic associations of Escherichia coli clonal group A, 1998-2007

    Trans-Global Initiative for Antimicrobial Resistance Analysis Investigators, Nov 2011, In : Emerging infectious diseases. 17, 11, p. 2001-9 9 p.

    Research output: Contribution to journalArticle

  15. Published

    Lipid phenotyping of lung epithelial lining fluid in healthy human volunteers

    U-BIOPRED Study Group, 17 Sep 2018, In : Metabolomics. 14, 10, p. 123

    Research output: Contribution to journalArticle

  16. Published

    Identification and prospective stability of eNose derived inflammatory phenotypes in severe asthma.

    U-BIOPRED Study Group & Fowler, S., 2018, In : Journal of Allergy and Clinical Immunology.

    Research output: Contribution to journalArticle

  17. Published

    Critical view of anaphylaxis epidemiology: Open questions and new perspectives

    Joint Allergy Academies, 2018, In : Allergy, Asthma and Clinical Immunology. 14, 1, 1 p., 12.

    Research output: Contribution to journalReview article

  18. Published

    Bronchiolitis needs a revisit: Distinguishing between virus entities and their treatments

    EAACI Task Force on Clinical Practice Recommendations on Preschool Wheeze, 25 Nov 2018, In : Allergy: European Journal of Allergy and Clinical Immunology.

    Research output: Contribution to journalArticle

  19. Published

    Validation of the MASK-rhinitis visual analogue scale on smartphone screens to assess allergic rhinitis control

    The MASK Study Group, 29 Nov 2017, In : Clinical and Experimental Allergy. 47, 12, p. 1526-1533 8 p.

    Research output: Contribution to journalArticle

  20. E-pub ahead of print

    Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection

    Sanger Mouse Genetics Project, 14 Jan 2019, In : PLoS Pathogens. 15, 1, p. e1007265

    Research output: Contribution to journalArticle

  21. Published

    Emphysema and extrapulmonary tissue loss in COPD: a multi-organ loss of tissue phenotype

    ECLIPSE Study Investigators, 2018, In : The European respiratory journal. 51, 2

    Research output: Contribution to journalArticle

  22. Published

    Exploring the relevance and extent of small airways dysfunction in asthma: baseline data from the AssessmenT of smalL Airways involvemeNT In aSthma (ATLANTIS) prospective cohort study

    ATLANTIS study group, Postma, D. S., Brightling, C., Baldi, S., Van den Berge, M., Fabbri, LM., Gagnatelli, A., Papi, A., Van der Molen, T., Rabe, KF., Siddiqui, S., Singh, D., Nicolini, G. & Kraft, M., 2019, In : The Lancet Respiratory Medicine.

    Research output: Contribution to journalArticle

  23. Published

    Contribution of airway eosinophils in airway wall remodeling in asthma: role of MMP-10 and MET

    U-BIOPRED Project Team, 2019, In : Allergy.

    Research output: Contribution to journalArticle

  24. Published

    Remotely monitored therapy and nitric oxide suppression identifies nonadherence in severe asthma

    Medical Research Council UK Refractory Asthma Stratification Programme (RASP-UK), 2019, In : American Journal of Respiratory and Critical Care Medicine . 199, 4, p. 454-464 11 p.

    Research output: Contribution to journalArticle

  25. Published

    Genetic landscape of chronic obstructive pulmonary disease identifies heterogeneous cell-type and phenotype associations

    International COPD Genetics Consortium & Vestbo, J., 2019, In : Nature Genetics.

    Research output: Contribution to journalArticle

  26. Published
  27. Published

    Sputum proteomic signature of gastro-oesophageal reflux in patients with severe asthma

    the U-BIOPRED study group, 1 Apr 2019, In : Respiratory Medicine. 150, p. 66-73 8 p.

    Research output: Contribution to journalArticle

  28. Published

    “T2-high” in severe asthma related to blood eosinophil, exhaled nitric oxide and serum periostin

    U-BIOPRED Study Group, 2019, In : European Respiratory Journal. 53, 1, 1800938.

    Research output: Contribution to journalArticle

  29. Published

    Stratification of asthma phenotypes by airway proteomic signatures

    U-BIOPRED Study Group, Jul 2019, In : The Journal of allergy and clinical immunology.

    Research output: Contribution to journalArticle

  30. Published

    IL-17-high asthma with features of a psoriasis immunophenotype

    U-BIOPRED Study Group, 2019, In : The Journal of allergy and clinical immunology.

    Research output: Contribution to journalArticle

  31. Published

    Epithelial dysregulation in obese severe asthmatics with gastro-oesophageal reflux

    U-BIOPRED Study Group, 27 Jun 2019, In : The European respiratory journal.

    Research output: Contribution to journalArticle

  32. Published

    Mobile technology offers novel insights into the control and treatment of allergic rhinitis: The MASK study

    MASK study group, 2019, In : Journal of Allergy and Clinical Immunology.

    Research output: Contribution to journalArticle

  33. Published

    Neoantigen-directed immune escape in lung cancer evolution

    The TRACERx consortium, 2019, In : Nature. 567, 7749, p. 479-485 7 p.

    Research output: Contribution to journalArticle

  34. Published

    Challenges in investigating patients with isolated decreased serum IgM: The SIMcal study

    The SIMcal Consortium, 18 Mar 2019, In : Scandinavian Journal of Immunology. 89, 6, e12763.

    Research output: Contribution to journalArticle

  35. Published
  36. Published

    SIGN158: British guideline on the management of asthma

    SIGN Guideline development group, 2019, Scottish Intercollegiate Guidelines Network.

    Research output: Book/ReportCommissioned report

  37. Published

    Cochlear implantation in children with Auditory Neuropathy: Lessons from Brown Vialetto Van Laere Syndrome

    Anderson, P., Schaefer, S., Henderson, L. & Bruce, I., 2018, In : Cochlear Implants International.

    Research output: Contribution to journalArticle

  38. Published

    Stable and Unstable Vortex Knots in Excitable Media

    Binysh, J., Whitfield, C. & Alexander, G. P., 2019, In : Physical Review E: covering statistical, nonlinear, biological, and soft matter physics. 99, 012211.

    Research output: Contribution to journalArticle

  39. Published

    Tuberculosis/cryptococcosis co-infection in China between 1965 and 2016

    Fang, W., Zhang, L., Liu, J., Denning, D., Hagen, F., Jiang, W., Hong, N., Deng, S., Lei, X., Deng, D., Liao, W., Xu, J., Boekhout, T., Chen, M. & Pan, W., 2017, In : Emerging Microbes & Infections. 6

    Research output: Contribution to journalArticle

  40. Published

    Surgical Management of the Drooling Child

    Lawrence, R. & Bateman, N., 2018, In : Current Otorhinolaryngology Reports.

    Research output: Contribution to journalArticle

  41. Published

    An essential role for the baseplate protein Gp45 in phage adsorption to Staphylococcus aureus

    Li, X., Koç, C., Kühner, P., Stierhof, Y-D., Krismer, B., Enright, M. C., Penadés, J. R., Wolz, C., Stehle, T., Cambillau, C., Peschel, A. & Xia, G., 23 May 2016, In : Scientific Reports. 6, 26455.

    Research output: Contribution to journalArticle

  42. Published

    Novel Point Mutations in cyp51A and cyp51B Genes Associated with Itraconazole and Posaconazole Resistance in Aspergillus clavatus Isolates

    Abastabar, M., Hosseini, T., Valadan, R., Lagzian, M., Haghani, I., Aslani, N., Badali, H., Nouripour-Sisakht, S., Nazeri, M., Gholami, S., Vakili, M., Bowyer, P., Shokohi, T. & Hedayati, M. T., 1 Jun 2019, In : Microbial drug resistance (Larchmont, N.Y.). 25, 5, p. 652-662 11 p.

    Research output: Contribution to journalArticle

  43. Published

    Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution

    Abbosh, C., Birkbak, NJ., Jamal-Hanjani, M., Constantin, T., Salari, R., Le Quesne, J., Moore, DA., Veeriah, S., Rosenthal, R., Marafioti, T., Kirkizlar, E., Watkins, TBK., McGranahan, N., Ward, S., Martinson, L., Riley, J., Fraioli, F., Al Bakir, M., Gronroos, E., Zambrana, F. & 83 othersEndozo, R., Bi, WL., Fennessy, FM., Sponer, N., Johnson, D., Laycock, J., Shafi, S., Czyzewska-Khan, J., Rowan, A., Chambers, T., Matthews, N., Turajlic, S., Hiley, C., Lee, SM., Forster, MD., Ahmad, T., Falzon, M., Borg, E., Lawrence, D., Hayward, M., Kolvekar, S., Panagioyopoulos, N., Janes, SM., Thakrar, R., Ahmed, A., Blackhall, F., Summers, Y., Hafez, D., Naik, A., Ganguly, A., Kareht, S., Shah, R., Joseph, L., Quinn, AM., Crosbie, P., Naidu, B., Middleton, G., Langman, G., Trotter, S., Nicolson, M., Remmen, H., Kerr, K., Chetty, M., Gomersall, L., Fennell, DA., Nakas, A., Rathinam, S., Anand, G., Khan, S., Russell, P., Ezhil, V., Ismail, B., Irvin-Sellers, M., Prakash, V., Lester, JF., Kornaszewska, M., Attanoos, R., Adams, H., Davies, H., Oukrif, D., Akarca, AU., Hartley, JA., Lowe, HL., Lock, S., Iles, N., Bell, H., Ngai, Y., Elgar, G., Szallasi, Z., Schwarz, RF., Herrero, J., Stewart, A., Quezada, SA., Peggs, KS., Van Loo, P., Dive, C., Lin, CJ., Rabinowitz, M., Aerts, HJWL., Hackshaw, A., Shaw, JA., Zimmermann, BG. & Swanton, C., 25 May 2017, In : Nature. 545, p. 446–451

    Research output: Contribution to journalArticle

  44. Published

    P2X3 receptor antagonist (AF-219) in refractory chronic cough: a randomised, double-blind, placebo-controlled phase 2 study.

    Abdulqawi, R., Dockry, R., Holt, K., Layton, G., McCarthy, B. G., Ford, A. P. & Smith, J. A., 28 Mar 2015, In : The Lancet. 385, 9974, p. 1198-1205 7 p.

    Research output: Contribution to journalArticle

  45. Published

    Gastro-oesophageal reflux and cough

    Abdulqawi, R., Houghton, L. A. & Smith, J. A., May 2013, In : Journal of Association of Physicians of India. 61, Suppl 5, p. 17-19 3 p.

    Research output: Contribution to journalArticle

  46. Published

    Signal transduction controls heterogeneous NF-κB dynamics and target gene expression through cytokine-specific refractory states

    Adamson, A., Boddington, C., Downton, P., Rowe, W., Bagnall, J., Lam, C., Maya-Mendoza, A., Schmidt, L., Harper, C. V., Spiller, D., Rand, D. A., Jackson, D., White, M. R. H. & Paszek, P., 6 Jul 2016, In : Nature Communications. 7, 12057.

    Research output: Contribution to journalArticle

  47. Published

    Cardiac Troponin I and Cardiovascular Risk in Patients With Chronic Obstructive Pulmonary Disease

    Adamson, P. D., Anderson, J. A., Brook, R. D., Calverley, P. M. A., Celli, B. R., Cowans, N. J., Crim, C., Dixon, I. J., Martinez, F. J., Newby, D. E., Vestbo, J., Yates, J. C. & Mills, N. L., 4 Sep 2018, In : Journal of the American College of Cardiology. 72, 10, p. 1126-1137

    Research output: Contribution to journalArticle

  48. Published

    EAACI Guidelines on Allergen Immunotherapy: House dust mite-driven allergic asthma

    Agache, I., Lau, S., Akdis, C. A., Smolinska, S., Bonini, M., Cavkaytar, O., Flood, B., Gajdanowicz, P., Izuhara, K., Kalayci, O., Mosges, R., Palomares, O., Papadopoulos, N. G., Sokolowska, M., Angier, E., Fernandez-Rivas, M., Pajno, G., Pfaar, O., Roberts, GC., Ryan, D. & 6 othersSturm, G. J., van Ree, R., Varga, E. M., van Wijk, R. G., Yepes-Nuñez, JJ. & Jutel, M., 16 May 2019, In : Allergy: European Journal of Allergy and Clinical Immunology. 74, 5, p. 855-873 19 p.

    Research output: Contribution to journalArticle

  49. Published

    The role of the multidisciplinary team in antifungal stewardship

    Agrawal, S., Barnes, R., Brüggemann, R. J., Rautemaa-Richardson, R. & Warris, A., Nov 2016, In : The Journal of antimicrobial chemotherapy. 71, suppl 2, p. ii37-ii42 6 p.

    Research output: Contribution to journalArticle

  50. Published

    Inhaled corticosteroids in COPD: Friend or foe?

    Agusti, A., Fabbri, L. M., Singh, D., Vestbo, J., Celli, B., Franssen, F. M. E., Rabe, K. F. & Papi, A., 2018, In : European Respiratory Journal. 52, 6, 1801219.

    Research output: Contribution to journalArticle

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